Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3250 ATGTCTGCAATGATGGATGATCAAGGTTCCTCTGTTATGTTTATCCGTGGAAACCAAGTTCACTCCATGGATGGTTCAAGCTTGGAGCTCGAGTTAGAAACCTTCCAGAGACAAGTCACGTTGCGGTTCCTTGAGCTGGCCGCAGTTGGAAATGATGATTTGCTTTCACTCGCATGGATGAGGAAGCTCCTTGATATCTTCATCTTATGCCAAGACGAATTGAGGATGATTTTCTTCAATCACAGGGCTCAGGTCATGAAGCCCCCAATGGACCGAATTGTTTCTGATTTCTTTGAACGCTGCGTGAAGGCCCTTGATCTCTGCAACGCCGTCCGTGACGGAATTGAACAGATTAAGCAGTGTCAGAGGCTGTTAGAGATTGTTCTATGTGCATTGGATCAAAAGAGGATCATTGGTGAGGGCCAATGCCGCCGTGCCAAGAAGGCTCTCGCTGATTTGGCTAATTGTATGTTTGATGATAAGGAATCTAGTGCTTACATGGCTCTTAGGAATAGATCCTTTGGTAGAAACACTACCATTAAGGATTTGTATCAAATTCACAATCAAAATAGTAACTACCAACACCGATCAGTGGGCCATTTTCGATCGCTCTCATGGAGCGTTTCGAGGAATTGGTCTGCTGCTAAGCAGCTCCAAGCAATTGGGAACAGCTTGTGCCCCCCTAAGAGTAATGATCTTGTGGCCACTAATGGCCTTGCTATGCCGGTTTATACGATGAGCTCGGTCCTGTTGTTTGTAATGTGGGCTCTTGTGGCTGCAATTCCATGCCAGGATCGCAGATTGCAGCTCCACATTTTGATTCCGAGACAGTTTCCTTGGTCTGCGCCGTTGCTGTCGCTCCATGAGAGGATCATGGAGGATTCCAAGAAGAAGGAGAGGAAGAATGCTTGTGGCTTGCTGAGGGAGATTCAACAGATTGAGAAATGTGCTAGGGTGATGAATGAGTTGGTTGACACTTTGCAGTTTCCATTAGCTGAGGAGAAAGGAGAGGAGGTTAGACAAAGAGTGCAAGATCTTTCACATGTTCTTGAGGCCCTCAAGGATGGATTAGACCCGTTGGAACGCCAAGTAAGGGAGGTGTTCCATGTAATTGTGCGCGGCCGAGTAGGGACTTGA 1137 0.4688 MSAMMDDQGSSVMFIRGNQVHSMDGSSLELELETFQRQVTLRFLELAAVGNDDLLSLAWMRKLLDIFILCQDELRMIFFNHRAQVMKPPMDRIVSDFFERCVKALDLCNAVRDGIEQIKQCQRLLEIVLCALDQKRIIGEGQCRRAKKALADLANCMFDDKESSAYMALRNRSFGRNTTIKDLYQIHNQNSNYQHRSVGHFRSLSWSVSRNWSAAKQLQAIGNSLCPPKSNDLVATNGLAMPVYTMSSVLLFVMWALVAAIPCQDRRLQLHILIPRQFPWSAPLLSLHERIMEDSKKKERKNACGLLREIQQIEKCARVMNELVDTLQFPLAEEKGEEVRQRVQDLSHVLEALKDGLDPLERQVREVFHVIVRGRVGT* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3250 378 PANTHER BPS1-LIKE PROTEIN 6 376 - -
Ahy5g3250 378 Pfam Protein ROH1-like 8 376 IPR008511 -
Ahy5g3250 378 PANTHER PLANT/F1M20-13 PROTEIN 6 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3250 Ahy-Chr5 114544834 114546691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3250 - - gmx:100806977 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3666 15 159501507 159503330 Ahy5g3250 5 114544834 114546691 hybridization
Ahy5g3250 5 114544834 114546691 Ahy19g2809 19 149955455 149957404 PCT
Ahy5g3250 5 114544834 114546691 Ahy9g2788 9 116998419 117000356 PCT
Ahy19g2809 19 149955455 149957404 Ahy5g3250 5 114544834 114546691 PCT
Ahy9g2788 9 116998419 117000356 Ahy5g3250 5 114544834 114546691 PCT