Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3666 ATGTCTGCAATCATGGATGATCAAGGTTCCTCTGTTATGTCTATCCGTGGAAACCAAGTTCACTCCATGGATGGTTCAAGCTTGGAGCTTGAGTTAGAAACCTTTCAGAGACAAGTCACGTTGCGGTTCCTTGAGCTGGCCGCGGTTGGAAATGATGATTTGCTTTCACTCGCATGGATGAGGAAGCTCCTTGATATCTTCATCTTATGCCAAGACGAATTGAGGATGATTTTCTTCAATCACAGGGCTCAGGTCATGAAGCCCCCAATGGACCGAATTGTTTCTGATTTCTTTGAACGCTGCGTGAAGGCCCTTGATCTCTGCAACGCCGTCCGTGACGGAATTGAACAGATTAAGCAGTGTCAGAGGCTGTTAGAGATTGTTCTATGTGCATTGGATCAAAAGAGGATCATTGGTGAGGGCCAATGCCGCCGTGCCAAGAAGGCTCTCGCTGATTTGGCTAATTGTATGTTTGATGATAAGGAATCTAGTGCTTACATGGCTCTTAGGAATAGATCCTTTGGTAGAAACACTACCATTAAGGATTTGTATCAAATTCACAATCAAAATAGTAACTACCAGCACCGATCAGTGGGCCATTTTCGATCGCTCTCATGGAGCGTTTCGAGGAATTGGTCTGCTGCTAAGCAGCTCCAAGCAATTGGGAACAGCTTGTGCCCCCCTAAGAGTAATGATCTTGTGGCCACTAATGGCCTTGCTATGCCGGTTTATACGATGAGCTCGGTCCTGTTGTTTGTAATGTGGGCTCTTGTGGCTGCAATTCCATGCCAGGATCGCAGATTGCAGCTCCACATTTTGATTCCGAGACAGTTTCCTTGGTCTGCGCCGTTGCTGTCGCTCCATGAGAGGATCATGGAGGATTCCAAGAAGAAGGAGAGGAAGAATGCTTGTGGCTTGCTGAGGGAGATTCAACAGATTGAGAAATGTGCTAGGGTGATAAATGAGTTGGTTGACACTTTGCAGTTTCCATTAGCTGAGGAGAAAGGAGAGGAGGTTAGACAAAGAGTGCAAGATCTTTCACATGTTCTTGAGGCCCTCAAGGATGGATTAGACCCGTTGGAACGCCAAGTAAGGGAGGTGTTCCATGTAATTGTGCGCGGCCGAGTAGGGACTTGA 1137 0.4688 MSAIMDDQGSSVMSIRGNQVHSMDGSSLELELETFQRQVTLRFLELAAVGNDDLLSLAWMRKLLDIFILCQDELRMIFFNHRAQVMKPPMDRIVSDFFERCVKALDLCNAVRDGIEQIKQCQRLLEIVLCALDQKRIIGEGQCRRAKKALADLANCMFDDKESSAYMALRNRSFGRNTTIKDLYQIHNQNSNYQHRSVGHFRSLSWSVSRNWSAAKQLQAIGNSLCPPKSNDLVATNGLAMPVYTMSSVLLFVMWALVAAIPCQDRRLQLHILIPRQFPWSAPLLSLHERIMEDSKKKERKNACGLLREIQQIEKCARVINELVDTLQFPLAEEKGEEVRQRVQDLSHVLEALKDGLDPLERQVREVFHVIVRGRVGT* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3666 378 Pfam Protein ROH1-like 8 376 IPR008511 -
Ahy15g3666 378 PANTHER BPS1-LIKE PROTEIN 6 376 - -
Ahy15g3666 378 PANTHER PLANT/F1M20-13 PROTEIN 6 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3666 Ahy-Chr15 159501507 159503330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3666 - - gmx:100806977 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3666 15 159501507 159503330 Ahy5g3250 5 114544834 114546691 hybridization
Ahy15g3666 15 159501507 159503330 Ahy19g2809 19 149955455 149957404 PCT
Ahy15g3666 15 159501507 159503330 Ahy9g2788 9 116998419 117000356 PCT
Ahy19g2809 19 149955455 149957404 Ahy15g3666 15 159501507 159503330 PCT
Ahy9g2788 9 116998419 117000356 Ahy15g3666 15 159501507 159503330 PCT