Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2809 ATGCCCGCAACGGACTACCAAGGTTCGTCTCCGTCATCATTGTCCCATTTCGGCCGTTCATTTCTGAACATACACCGTGATCATCAGGTTCACTCCATGGAAGGTTCAAGCTTGGAGGTGGAGCTGGAATCGTTTCAGCAACACGTGACTGACCAGTTCCTTGAGCTGTCGTCGGTTAGCCATGAAGAATTGGTGTCACTTTCATGGGTTGGGAAGCTCCTTGATTCGTTCCTGTGCTGCCAAGAGGAGTTCAGGGCCATCCTCCACACCCACAAGGTGCTTGTTTTAAGGCCACCCTCGGATCGCATGGTGTCTGAGTACTTTGAGCGAAGTGTGAAGGCCTTGGATGTTTGCAATGCAATCCGTGATGGGATTGAGCAGATTCGCCAATGGCAGAAGCTCTTGGAGATTGTTCGTTGTGCAATGGGAGGGAACCAGAGGAGCATTGGTGAGGGCCAATTTCGAAGAGCAAAGAAGGCTCTTATTGATTTGGCAATTGGTATGCTTGATGATAAGGATTCTTCTAATGCCTCCATTAATGCACATAGGAATAGGTCATTTGGCCGCAACACTGGTGGTGGTAGAGACCACCATCATAATAACAATCTTCACAATCGATCGTTGGGGCATTTTCGATCCCTTTCGTGGAGTGTTTCTCGAACTTGGTCTGCTGCTAGGCAGCTCCAAGCAATTGGGAACAATATGCATCCGCCTAAGGCTAATGAGCTTGTGGCTTCCGGAGGCCTTGCAATGCCGGTTTTCATCATGAATTCGGTGCTTTTGTTCGTCATGTGGTGTCTTGTGGCTGCAATTCCCTGCCAGGATCGCGGCCTTCAAGTCCATTTCAACATTCCTAGGAACTTCTTGTGGGCTGCTCCAATGCTATCGCTCCACGACAGGATCATGGAGGAGTCCAAGAAGAGGGACCGGAAGAATGCGTGTGGATTGCTCAGGGAGATTCATCAGATTGAGAAATGTGCTAGAGTGATGAATGAGTTGGCTGATTCAGTTCAGTTCCCATTGACAGAGGAAAAGGAAGCTGATGTTAGGCACAGAGCTCAAGAGGTTGCACAACTTTGTGATGCTTTGAAAGATGGGCTAGACCCTTTGGAGCGCCAAGTTAGGGAAGTGTTCCATAGAATTGTGAGAAGCAGAACAGAAGGGCTTGATTCTCTTGGAAAGCAAAACCTTGCTGATTAA 1200 0.485 MPATDYQGSSPSSLSHFGRSFLNIHRDHQVHSMEGSSLEVELESFQQHVTDQFLELSSVSHEELVSLSWVGKLLDSFLCCQEEFRAILHTHKVLVLRPPSDRMVSEYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVRCAMGGNQRSIGEGQFRRAKKALIDLAIGMLDDKDSSNASINAHRNRSFGRNTGGGRDHHHNNNLHNRSLGHFRSLSWSVSRTWSAARQLQAIGNNMHPPKANELVASGGLAMPVFIMNSVLLFVMWCLVAAIPCQDRGLQVHFNIPRNFLWAAPMLSLHDRIMEESKKRDRKNACGLLREIHQIEKCARVMNELADSVQFPLTEEKEADVRHRAQEVAQLCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGKQNLAD* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2809 399 PANTHER BPS1-LIKE PROTEIN 1 396 - -
Ahy19g2809 399 PANTHER OS04G0688000 PROTEIN 1 396 - -
Ahy19g2809 399 Pfam Protein ROH1-like 15 392 IPR008511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2809 Ahy-Chr19 149955455 149957404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2809 - - ccaj:109812538 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2809 19 149955455 149957404 Ahy19g2809 19 149955455 149957404 ECH
Ahy19g2809 19 149955455 149957404 Ahy9g2788 9 116998419 117000356 hybridization
Ahy15g3666 15 159501507 159503330 Ahy19g2809 19 149955455 149957404 PCT
Ahy5g3250 5 114544834 114546691 Ahy19g2809 19 149955455 149957404 PCT
Ahy19g2809 19 149955455 149957404 Ahy15g3666 15 159501507 159503330 PCT
Ahy19g2809 19 149955455 149957404 Ahy5g3250 5 114544834 114546691 PCT