Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3061 ATGGGGGGTGCTAGTTCCTCAATTAGTGTAGCAGAAATTGAGGATGTTGTTTCAGAATCAACAGGGCTTGGTGATATTCCAGAGAGCTGCATCTCATTCATAATGAAGAGTTTTGATCCAAAAGAGATTTGCCAATTGGCTAAAGTGAACAAAACTTTTCATAGAGCTTCCTCAGCTGATTTTGTGTGGGAATCAAAGTTGCCACAATCATATAAGTTCCTTCTCAATAAGATTCTTGGTGATAATAACAAAGAGGATCTAATTAGAACCATGTCCAAGAAAGAGGTTTATGCCAAACTATGTCGACCTAATTTCTTTGATGGTGGCACCAAAGAAGTTTGGTTGGATAGAAGCAGTGGACAAGTTTGTTTGTTCATCTCATCAAAGTCTTTCAAGATTACAGGAATTGATGACAGAAGATATTGGAATAATATTCCAACTGAAGAATCCAGGTTTAAAAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGTTGGGGGAACTAGACTTTGAATTTCCAAGAGGGAAATATAGCATTTTTTTCAGGCTTCATTTGGGAAAGACCTCAAATAGATTGGGCCGCAGAGTGTGCAACCTGGGCCAAGTCCATGGTTGGGACATCAAGCCCGTTAGATTTCAACTATCCACATCTGATGGCCAGAATTCACTTTCCCAGTGTTATTTGAGTGGGCCAGGAGAGTGGACCCATTATCATGTTGGAGATTTTGTCATTGATAAGCCCAATGGGCCCACAACCATCAAGTTTTCACTGGCCCAAATTGATTGCACTCACACAAAAGGCGGGCTTTGCATAGATGGGGCAGTGATTTGCCCAACCCAGAATACAAAACAATTTTGA 864 0.4062 MGGASSSISVAEIEDVVSESTGLGDIPESCISFIMKSFDPKEICQLAKVNKTFHRASSADFVWESKLPQSYKFLLNKILGDNNKEDLIRTMSKKEVYAKLCRPNFFDGGTKEVWLDRSSGQVCLFISSKSFKITGIDDRRYWNNIPTEESRFKSVAYLQQMWWVEVLGELDFEFPRGKYSIFFRLHLGKTSNRLGRRVCNLGQVHGWDIKPVRFQLSTSDGQNSLSQCYLSGPGEWTHYHVGDFVIDKPNGPTTIKFSLAQIDCTHTKGGLCIDGAVICPTQNTKQF* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3061 287 ProSiteProfiles F-box domain profile. 20 66 IPR001810 GO:0005515
Ahy5g3061 287 Pfam Phloem protein 2 122 280 IPR025886 -
Ahy5g3061 287 PANTHER F-BOX PROTEIN PP2-A15 17 285 - -
Ahy5g3061 287 SUPERFAMILY F-box domain 17 102 IPR036047 GO:0005515
Ahy5g3061 287 PANTHER F-BOX PROTEIN 17 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3061 Ahy-Chr5 112286984 112291283 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3061 - - gmx:100816360 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3471 15 157426234 157430707 Ahy5g3061 5 112286984 112291283 hybridization
Ahy5g3061 5 112286984 112291283 Ahy19g3531 19 158081064 158084933 PCT
Ahy5g3061 5 112286984 112291283 Ahy9g2094 9 109605389 109608864 PCT
Ahy19g3531 19 158081064 158084933 Ahy5g3061 5 112286984 112291283 PCT
Ahy9g2094 9 109605389 109608864 Ahy5g3061 5 112286984 112291283 PCT