Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3471 ATGGGGGCTGCTAGTTCCTCAATTAGTGTAGCAGAAATTGAGGATGTTGTTTCAGAATCAAGATCATCAACAGGGCTTGGTGACATTCCAGAGAGCTGCATCTCATTCATGATGATGAGTTTTGATCCAAAAGAGATTTGCCAATTGGCTAAAGTGAACAAAACTTTTCATAGAGCTTCCTCAGCTGATTTTGTGTGGGAATCAAAGTTGCCACAATCATATGAGTTCCTTCTCAATAAGATTCTTGGTGATAACAAAGAGGATCTAATTAGAATCATGTCCAAGAAAGAGGTTTATGCCAAACTATGTCGACCTAATTTCTTTGATGGTGGCACCAAAGAAGTTTGGTTGGATAGAAGCAGTGGACAAGTTTGTTTGTTCATCTCATCAAAGTCTTTCAAGATTACAGGAATTGATGACAGAAGATATTGGAATAATATTCCAACTGAAGAATCCAGGTTTAAAAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGTTGGGGGAACTAGACTTTGAATTTCCAAGAGGGAAATATAGCGTTTTTTTCAGGCTTCATTTGGGAAAGACCTCAAACAGATTGGGCCGAAGAGTGTGCAACCTGGCCCAAGTCCATGGTTGGGACATCAAGCCCGTTAGATTTCAACTATCCACATCTGATGGCCAGAATTCACTTTCCCAGTGTTACTTGATTGGGCCAGGAGAGTGGACCCATTATCATGTTGGGTATTTTGTCATTGATAAGCCCAATGGGCCCACAACCATCAAGTTTTCCCTGGCCCAAATTGATTGCACTCACACAAAAGGCGGGCTTTGCATAGATGGGGCAGTGATTTGCCCAACCCAGAATACAAAACAATTTTGA 870 0.4115 MGAASSSISVAEIEDVVSESRSSTGLGDIPESCISFMMMSFDPKEICQLAKVNKTFHRASSADFVWESKLPQSYEFLLNKILGDNKEDLIRIMSKKEVYAKLCRPNFFDGGTKEVWLDRSSGQVCLFISSKSFKITGIDDRRYWNNIPTEESRFKSVAYLQQMWWVEVLGELDFEFPRGKYSVFFRLHLGKTSNRLGRRVCNLAQVHGWDIKPVRFQLSTSDGQNSLSQCYLIGPGEWTHYHVGYFVIDKPNGPTTIKFSLAQIDCTHTKGGLCIDGAVICPTQNTKQF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3471 289 PANTHER F-BOX PROTEIN PP2-A15 1 287 - -
Ahy15g3471 289 Pfam Phloem protein 2 124 282 IPR025886 -
Ahy15g3471 289 PANTHER F-BOX PROTEIN 1 287 - -
Ahy15g3471 289 SUPERFAMILY F-box domain 13 103 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3471 Ahy-Chr15 157426234 157430707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3471 - - gmx:100816360 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3471 15 157426234 157430707 Ahy19g3531 19 158081064 158084933 ECH
Ahy15g3471 15 157426234 157430707 Ahy15g3471 15 157426234 157430707 ECH
Ahy15g3471 15 157426234 157430707 Ahy5g3061 5 112286984 112291283 hybridization
Ahy15g3471 15 157426234 157430707 Ahy19g3531 19 158081064 158084933 PCT
Ahy15g3471 15 157426234 157430707 Ahy9g2094 9 109605389 109608864 PCT
Ahy19g3531 19 158081064 158084933 Ahy15g3471 15 157426234 157430707 PCT
Ahy9g2094 9 109605389 109608864 Ahy15g3471 15 157426234 157430707 PCT