Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3531 ATGGGGGCTGGTATTTCTTTGTCAACTTCAAACAAGTATGATGATGATGATGGTGATGGAAGGCCAGGTCTTGGGGACATACCAGAGAGCTGCATATCAAGGTTGCTGATGAATCTGGATCCACCAGAAATATGCCAACTGGCTAGAGTGAACCGCACTTTTCACAGAGCTTCCTCAGCTGATTTTGTGTGGGAATCAAAGTTGCCACAATCCTACAAGTTCCTTGCCACAAAAGTCTTTGGTCAAGACAATATTATTGCTTCTATGACTAAGAAAGACATTTATACAAAACTATGTTTACCCAATCGCTTCGATGCTGGCACCAAGGAAGTTTGGTTGGATAAATGCAGCGGACAAATTTGTTTGTTCTTGTCATCCAAGTCCTTCAACATAACAGGAATAGATGATAGAAGATATTGGAATTATATTCCAACTGAAGAATCCAGGTTCAAGAGCGTTGCCTATCTTCAACAAATGTGGTGGGTTGAGGTGGTGGGGGAGCTAGAGTTTGAATTCCCTGTGGGCAGTTACACCCTATTTTTCAGACTCCAATTGGGCATGGCCTCTAAAAGAAAGGGCCGCCGTGTGTGCAACGTGGACCAAGTCCATGGCTGGGACATCAAGCCCGTCCGATTTCAACTCTCCACATCACACGGCCAGCGTTCTCACTCAGAGTCTTATTTGACTGGCCCAGGGGAGTGGATCCACTACCGTGTTGGAGATTTTATTGTTGATAGGCCCAATGAGCCCACTAAACTGAAGTTCTCTTTGGCCCAAATTGATTGCACTCACACCAAAGGTGGCCTCTGCATAGATGGTGCCATCATCTGCCCAACCCAGTTTAGCCACAAAATTTTACTCTTCTAG 867 0.4521 MGAGISLSTSNKYDDDDGDGRPGLGDIPESCISRLLMNLDPPEICQLARVNRTFHRASSADFVWESKLPQSYKFLATKVFGQDNIIASMTKKDIYTKLCLPNRFDAGTKEVWLDKCSGQICLFLSSKSFNITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVVGELEFEFPVGSYTLFFRLQLGMASKRKGRRVCNVDQVHGWDIKPVRFQLSTSHGQRSHSESYLTGPGEWIHYRVGDFIVDRPNEPTKLKFSLAQIDCTHTKGGLCIDGAIICPTQFSHKILLF* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3531 288 MobiDBLite consensus disorder prediction 1 22 - -
Ahy19g3531 288 Pfam Phloem protein 2 120 278 IPR025886 -
Ahy19g3531 288 PANTHER F-BOX PROTEIN PP2-A15 1 285 - -
Ahy19g3531 288 SUPERFAMILY F-box domain 17 82 IPR036047 GO:0005515
Ahy19g3531 288 ProSiteProfiles F-box domain profile. 21 67 IPR001810 GO:0005515
Ahy19g3531 288 PANTHER F-BOX PROTEIN 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3531 Ahy-Chr19 158081064 158084933 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3531 - - gmx:100795463 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3471 15 157426234 157430707 Ahy19g3531 19 158081064 158084933 ECH
Ahy19g3531 19 158081064 158084933 Ahy19g3531 19 158081064 158084933 ECH
Ahy19g3531 19 158081064 158084933 Ahy9g2094 9 109605389 109608864 hybridization
Ahy15g3471 15 157426234 157430707 Ahy19g3531 19 158081064 158084933 PCT
Ahy5g3061 5 112286984 112291283 Ahy19g3531 19 158081064 158084933 PCT
Ahy19g3531 19 158081064 158084933 Ahy15g3471 15 157426234 157430707 PCT
Ahy19g3531 19 158081064 158084933 Ahy5g3061 5 112286984 112291283 PCT