Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3034 ATGCAACACTCTGCAAATCAAATGGCCAATTCTTACTCAGGTAATTCCAATCATATCTCAAAAGAAGACGCAAAGGAAACAAGTTCGCTGGTTGTTTCCTTTGGGGAACTGCTGATAGACTTTGTGCCAACAGTGGGAGGAGTGTCGCTGGCCGAAGCACCGGCTTTTCAGAAAGCTCCTGGTGGAGCTCCTGCCAATGTAGCTGTTGGTATATCTAGACTTGGAGGTTCATCAGCTTTCGTCGGAAAGGTTGGAGCAGACGAGTTCGGTTACATGTTGGCCAACATATTGAAGGAAAACAATGTTGACATGTCTGGCATGCGGTTTGACCCGAATGCTAGAACTGCATTAGCTTTTGTTACACTTAGAGCTGACGGTGAACGAGAATTCTTGTTTTTCCGGAATCCAAGTGCTGATATGCTTCTTCATGAATCAGAACTTGATATAAATCTCTTAAAGAAGGCTAGAGTCTTCCATTATGGCTCCATCAGCTTGATTGACGAGCCGTGCAAGTCAGCTCATCTTGCTGCTATGAGAATTGCCAGCAATTCTGGTAGTATTCTCTCTTATGATCCAAATTTGAGATTAGCACTATGGCCATCAGCCGAGGCTGCTCGCAAGGGCATAATGAGTATTTGGGATCAAGCCGATGTCATAAAGATAAGTGAGGAAGAGATTACATTTTTGACGGGTGGTGATGATCCTTATGATGATAATGTTGTATTGAAGAAACTTTTTCATCCAAATCTCAAACTTCTAATTGTTACTGAAGGCTCATCTGGTTGTAGATATTACACCAAGGAATTCAGGGGCAAAGTTGGAGGTGTTAAAGTCAAACCTGTTGACACAACTGGTGCCGGTGATGCATTTGTCGGTGGATTTCTCTACAACTTGGCTTCTGACCCAAGTATTCTTCAGGATGAGAAACGGCTGCGAAAAGCTCTATATTTCGCAAATGTATGCGGCGCCATCACTGTAACTGAGAGAGGTGCCATTCCTGCAATGCCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAATCTGCTTCAATATAG 1056 0.4328 MQHSANQMANSYSGNSNHISKEDAKETSSLVVSFGELLIDFVPTVGGVSLAEAPAFQKAPGGAPANVAVGISRLGGSSAFVGKVGADEFGYMLANILKENNVDMSGMRFDPNARTALAFVTLRADGEREFLFFRNPSADMLLHESELDINLLKKARVFHYGSISLIDEPCKSAHLAAMRIASNSGSILSYDPNLRLALWPSAEAARKGIMSIWDQADVIKISEEEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSSGCRYYTKEFRGKVGGVKVKPVDTTGAGDAFVGGFLYNLASDPSILQDEKRLRKALYFANVCGAITVTERGAIPAMPTKEAILQFLLESASI* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3034 351 CDD bac_FRK 30 332 - -
Ahy5g3034 351 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 282 295 IPR002173 GO:0016773
Ahy5g3034 351 MobiDBLite consensus disorder prediction 1 20 - -
Ahy5g3034 351 PRINTS Ribokinase signature 253 264 IPR002139 GO:0016301
Ahy5g3034 351 PRINTS Ribokinase signature 56 75 IPR002139 GO:0016301
Ahy5g3034 351 PRINTS Ribokinase signature 211 226 IPR002139 GO:0016301
Ahy5g3034 351 PANTHER FRUCTOKINASE-7-RELATED 21 347 - -
Ahy5g3034 351 SUPERFAMILY Ribokinase-like 31 345 IPR029056 -
Ahy5g3034 351 PANTHER HEXOKINASE FAMILY MEMBER 21 347 - -
Ahy5g3034 351 Pfam pfkB family carbohydrate kinase 30 337 IPR011611 -
Ahy5g3034 351 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 61 85 IPR002173 GO:0016773
Ahy5g3034 351 Gene3D - 27 350 IPR029056 -
Ahy5g3034 351 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3034 Ahy-Chr5 111879022 111882984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3034 K00847 - gmx:100778752 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3438 15 156938731 156942643 Ahy5g3034 5 111879022 111882984 hybridization
Ahy5g3034 5 111879022 111882984 Ahy19g3514 19 157857896 157860708 PCT
Ahy5g3034 5 111879022 111882984 Ahy9g2114 9 109896920 109899804 PCT
Ahy19g3514 19 157857896 157860708 Ahy5g3034 5 111879022 111882984 PCT
Ahy9g2114 9 109896920 109899804 Ahy5g3034 5 111879022 111882984 PCT