Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3514 ATGGCCCAGTTTACCCCCTCAGGTAAATCTGGTGATTTGAAACAAGAAGATGACAAGAAAACAAGTGAACTAGTTGTTTGCTTGGGTGAACTGTTAATAGACTTTGTACCAACGGTGGGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTAGCAGTTGGCATCTCAAGGCTTGGTGGTTCATCTGCTTTCATAGGCAAGGTAGGAAAGGATGAATTCGGGTATATGTTATGTGATATTTTAAAGCAGAACTTTGTTGATACATCTGGCGTGCGGTTTGACTCTGAAGCTAGAACTGCATTAGCTTTTGTCACGCTTAGAGCCGATGGCGAGCGCGAGTTCTTGTTTTTCCGGAACCCTAGTGCTGATATGCTTCTTCATGAGTCAGAGATTGACAAAAATCTCATACAGAAGGCTAAAATATTCCATTATGGTTCCATTAGCTTGATTCATGATCCATGCAAGTCAGCTCATCTTGCCGCCTTGCGAATCGCTAAAGAATCTGGTTGTATTCTCTCATATGATCCAAATTTGAGATTGGCGCTATGGCCATCAGCTGAGGCTGCTCAGAAAGGCATAATGAGTGTATGGGACAAAGCTGATATCATAAAGATAAGCGAGGAGGAGATTACGTTTTTGACAGAGGGTGATGATCCTAACGATGATGATGTTGTATTAAAGAAGCTTTTTCACCCTAATCTCAAGCTATTAATTGTGACACAAGGCTCAGAGGGTTGTAGATATTACACCAAGAAATTCAAAGGCCGGGTGGCAGGTGTTAAAGTTAACCCCATTGACACAACTGGGGCCGGTGATGCATTTGTTAGTGGGATTCTCTACAACATAGCTTCAGATCAAAGCATTTTACAGGAGGAGGAGCAACTCCGGAAAGCGCTACGATTTGCCAACATATGTGGTGCCATCACTGTGACAAAGAGAGGTGCAATTCCCGCACTACCTAACAAAGAAGCTGTTGCGCAGTTCATGTTAGAAGCAACTACAATATAG 1038 0.4355 MAQFTPSGKSGDLKQEDDKKTSELVVCLGELLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGKDEFGYMLCDILKQNFVDTSGVRFDSEARTALAFVTLRADGEREFLFFRNPSADMLLHESEIDKNLIQKAKIFHYGSISLIHDPCKSAHLAALRIAKESGCILSYDPNLRLALWPSAEAAQKGIMSVWDKADIIKISEEEITFLTEGDDPNDDDVVLKKLFHPNLKLLIVTQGSEGCRYYTKKFKGRVAGVKVNPIDTTGAGDAFVSGILYNIASDQSILQEEEQLRKALRFANICGAITVTKRGAIPALPNKEAVAQFMLEATTI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3514 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Ahy19g3514 345 CDD bac_FRK 24 326 - -
Ahy19g3514 345 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Ahy19g3514 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Ahy19g3514 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Ahy19g3514 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Ahy19g3514 345 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
Ahy19g3514 345 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
Ahy19g3514 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Ahy19g3514 345 Gene3D - 20 344 IPR029056 -
Ahy19g3514 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3514 Ahy-Chr19 157857896 157860708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3514 K00847 - gmx:100818404 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3438 15 156938731 156942643 Ahy19g3514 19 157857896 157860708 ECH
Ahy19g3514 19 157857896 157860708 Ahy19g3514 19 157857896 157860708 ECH
Ahy19g3514 19 157857896 157860708 Ahy9g2114 9 109896920 109899804 hybridization
Ahy15g3438 15 156938731 156942643 Ahy19g3514 19 157857896 157860708 PCT
Ahy5g3034 5 111879022 111882984 Ahy19g3514 19 157857896 157860708 PCT
Ahy19g3514 19 157857896 157860708 Ahy15g3438 15 156938731 156942643 PCT
Ahy19g3514 19 157857896 157860708 Ahy5g3034 5 111879022 111882984 PCT