Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2328 ATGGAAATTGAAGCAAGGGCAGCACCAATGGTGGCAAAGAAGCTCTTGAACATTCTAAGAATAGTTATGGTCATGTTAAGAAAAGGTATATCAAAGAGCAAACTCATTTCCGAGTTCAATCTCTTGCTCAAGCGCGGAAAGATAGCAGCCAGCAACGCAATCTCCACCACTCTTACTCTCCACCACCACTACGCCGCCGCCTTCACGCGCCACCGTTCCTCCTTCCGCAACAACAAAAACCTCTCCTTCTACCCTCGCGAATACCAATTCAGCTGCACCAGTAGCCCTGCCTTTAATTACCACAGCCGTCGCCACCATCGCTGCCACCACCACGAAGACGTTTCAACCCTATGTAAGGTTCTTGAGATGCTAAAAGATAACAACAACAATAGCAACTGTGAGATGATGATGGATTCGCCATTGATGCCATTGCCAGGGTTTGGAAAAAGCCCTAAGCAGTTGAGGATCACTGATTCCCCTTTTCCTCTCAAAGACGAAGAAGATTTTGATGATGACGATGGTGGCAAAATTGATATTAAAGCTGAAGAGTTTATTAAAAGGTTTTATAAGAATCTTCACTCACAACACACAAATTCTCCTTATTATTACTCTTGGGACCGATAA 624 0.4439 MEIEARAAPMVAKKLLNILRIVMVMLRKGISKSKLISEFNLLLKRGKIAASNAISTTLTLHHHYAAAFTRHRSSFRNNKNLSFYPREYQFSCTSSPAFNYHSRRHHRCHHHEDVSTLCKVLEMLKDNNNNSNCEMMMDSPLMPLPGFGKSPKQLRITDSPFPLKDEEDFDDDDGGKIDIKAEEFIKRFYKNLHSQHTNSPYYYSWDR* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2328 207 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 9 207 - -
Ahy5g2328 207 Pfam Cotton fibre expressed protein 176 195 IPR008480 -
Ahy5g2328 207 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 9 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2328 Ahy-Chr5 96076542 96077165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2328 - - cit:102612263 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2938 15 149513120 149514460 Ahy5g2328 5 96076542 96077165 hybridization
Ahy3g1713 3 33267537 33269109 Ahy5g2328 5 96076542 96077165 PCT
Ahy5g2328 5 96076542 96077165 Ahy3g1713 3 33267537 33269109 PCT