Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1713 ATGGAAATAGAGGGAAGCCAAGCGGTGGTGGCAAACAAGGTATGGAACATAGTAAGAGTATTATTCTTCATGTTGAGAAAGGGAATAGCGAAGAGCAAACTGGTCATGGAGTTCCATTCCATTCTGAAACGAGGCAAACTCGCCGGTAAGGCTTTGCTCAACACCCTCATCTTCAACCACCATCACCACCACCTCACGTGCCGCTCACACGACACACACCTCTCCTTCATCTCTCCCCGCCTCACCACCGACTACGAGTTCAGCTGCAGCAACAGCCCCGCCGTCAAAGTCAACCGTTTACGCTCCACCATCAAACGCACCAAACACCACTCCAAATACGACGACGTTTCAACCCTCACCGCCGTTCAGAAAGTCCTTGACATGTTGAATAACACTGATCCAAACAAGGTTGACGCTTCGCCTCTCGTCACATTGCCAGGGTTCGGTAAGAGCCCTATTGGGAAACAGTTGAGGGTTACCGATTCACCCTTCCCTCTCAAGGACGAAGGTGATAACGGCCAAGTTGACATGGCTGCCGAGGAATTCATCAGGAGGTTTTACAAGGAACTCAACATGCAGAAAAAACTCGCTCTTGAGTCTCCTAATTACCATAACTACTACTCTACTTGGGACAGATAG 639 0.4945 MEIEGSQAVVANKVWNIVRVLFFMLRKGIAKSKLVMEFHSILKRGKLAGKALLNTLIFNHHHHHLTCRSHDTHLSFISPRLTTDYEFSCSNSPAVKVNRLRSTIKRTKHHSKYDDVSTLTAVQKVLDMLNNTDPNKVDASPLVTLPGFGKSPIGKQLRVTDSPFPLKDEGDNGQVDMAAEEFIRRFYKELNMQKKLALESPNYHNYYSTWDR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1713 212 Pfam Cotton fibre expressed protein 173 195 IPR008480 -
Ahy3g1713 212 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 3 204 - -
Ahy3g1713 212 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 3 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1713 Ahy-Chr3 33267537 33269109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1713 - - jre:108982393 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy3g1713 3 33267537 33269109 Ahy15g2938 15 149513120 149514460 PCT
Ahy3g1713 3 33267537 33269109 Ahy5g2328 5 96076542 96077165 PCT
Ahy15g2938 15 149513120 149514460 Ahy3g1713 3 33267537 33269109 PCT
Ahy5g2328 5 96076542 96077165 Ahy3g1713 3 33267537 33269109 PCT