Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1877 ATGAATATCAAAGAGGTTGTTTTTCCTCTTCTTGTGTTTTTCTTTGCCTATTCTGGATTGGCCCTTTCAGTCTCAGAGCCCAAAAATGTTCCTCTGCTTCCTCATGCTGCTGATGATTCCTTCAGTGTTGGCTATATCCAAATGAAGAGTGCAGAGAACTGTTCTTACTTGGTGGCCATAAGTACAAGCTGTTCTTCACCTAAGATTACAACTGATGAAATCAGTATTGTTTTTGGTGATGCACAAGGCAACCAGGTATATGCAGAAAGACTGGGTGATAGAATTTCAAAGACATTTGAGCAGTGCTCCTCAGACACATTCCAGATAGATGGTGAATGCACTTCTGAGATATGCTTTGCATACCTTCGTAGATCTGGTTCCAAAACCAATGGATGGAAGCCTGAGAGTGTTAAAATCTACACCTACAACACTGACCCTGTTACTTTCAATTTCAACACCTCCATCCCCAATGACAAATGGTACGGCTACAATTTCTGCCAGGTTCCGCCGCCGCCATCGCCACCTCATCCTCCTTCCCCTCCTACTCCTTCCTCTTCACACCCTCTATACACCCTCAACTGCCTCATCTATGCTGTTCTAGGACTTGTTCTTACTCAAATTTGGATGTATTGA 633 0.4344 MNIKEVVFPLLVFFFAYSGLALSVSEPKNVPLLPHAADDSFSVGYIQMKSAENCSYLVAISTSCSSPKITTDEISIVFGDAQGNQVYAERLGDRISKTFEQCSSDTFQIDGECTSEICFAYLRRSGSKTNGWKPESVKIYTYNTDPVTFNFNTSIPNDKWYGYNFCQVPPPPSPPHPPSPPTPSSSHPLYTLNCLIYAVLGLVLTQIWMY* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1877 210 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 51 163 IPR036392 GO:0005515
Ahy5g1877 210 Gene3D PLAT/LH2 domain 51 163 - -
Ahy5g1877 210 PANTHER - 10 206 - -
Ahy5g1877 210 Pfam Embryo-specific protein 3, (ATS3) 47 166 IPR010417 -
Ahy5g1877 210 CDD PLAT 54 166 - -
Ahy5g1877 210 PANTHER EMBRYO-SPECIFIC PROTEIN 10 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1877 Ahy-Chr5 86937392 86940077 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1877 - - ahf:112751675 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3408 15 156563768 156566194 Ahy5g1877 5 86937392 86940077 hybridization
Ahy5g1877 5 86937392 86940077 Ahy19g3501 19 157708158 157710054 PCT
Ahy5g1877 5 86937392 86940077 Ahy9g2134 9 110234006 110235932 PCT
Ahy19g3501 19 157708158 157710054 Ahy5g1877 5 86937392 86940077 PCT
Ahy9g2134 9 110234006 110235932 Ahy5g1877 5 86937392 86940077 PCT