Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3501 ATGAAGCATCATCATCATCTTGTTGTTCTTCTGCTCTTGTTGGTCTGTGGAGTGACCCTATCAGTATCTGAGTCGGAGTCCTATGCTCTTAAGCCTCATATTGCCGAGTCTTTCAATGTCAGCTATCTTCAGCTGAAGAGCCAGGGGAGTTGCTCTTACACGGTGGTTATATCTACTAGTTGTTCTTCTCCTTCTTATACAAGGGATCAGATCAGTATTTCTTTTGGGGATTTTTATGGCAACCAGATATACGTACCGAGATTGGACGATCCGGCTTCAGGTACGTTCGAGCGCTGTTCTTCAGATACCTTTCAGATAAAAGGTCCTTGCGCGTATCAGATATGTTATGTGTACTTATATAGATCCGGCCTAGACGGTTGGATGCCGGAGAGTGTGAAAATCAGTGGTTACTATGGCAAGCCTATTACTTTCTATTACAACACATTCATCCCCAGAGATACATGGTATGGTTTTGATTGGTGCAATGCTGCTTCTTCTTCATACCACCTCTCTTCTCAGAAATGGCTTCTATTTTTGGTTCTGGGATTTGTTCTTCATTTTTGGTTGTAA 570 0.4246 MKHHHHLVVLLLLLVCGVTLSVSESESYALKPHIAESFNVSYLQLKSQGSCSYTVVISTSCSSPSYTRDQISISFGDFYGNQIYVPRLDDPASGTFERCSSDTFQIKGPCAYQICYVYLYRSGLDGWMPESVKISGYYGKPITFYYNTFIPRDTWYGFDWCNAASSSYHLSSQKWLLFLVLGFVLHFWL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3501 189 CDD PLAT 51 162 - -
Ahy19g3501 189 PANTHER EMBRYO-SPECIFIC PROTEIN ATS3B 5 188 - -
Ahy19g3501 189 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 158 IPR036392 GO:0005515
Ahy19g3501 189 Gene3D PLAT/LH2 domain 47 158 - -
Ahy19g3501 189 PANTHER - 5 188 - -
Ahy19g3501 189 Pfam Embryo-specific protein 3, (ATS3) 43 161 IPR010417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3501 Ahy-Chr19 157708158 157710054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3501 - - gmx:100305495 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3501 19 157708158 157710054 Ahy19g3501 19 157708158 157710054 ECH
Ahy19g3501 19 157708158 157710054 Ahy9g2134 9 110234006 110235932 hybridization
Ahy15g3408 15 156563768 156566194 Ahy19g3501 19 157708158 157710054 PCT
Ahy5g1877 5 86937392 86940077 Ahy19g3501 19 157708158 157710054 PCT
Ahy19g3501 19 157708158 157710054 Ahy15g3408 15 156563768 156566194 PCT
Ahy19g3501 19 157708158 157710054 Ahy5g1877 5 86937392 86940077 PCT