Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3408 ATGAATATCAAAGAGGTTGTTTTTCCTCTTCTTGTGTTTTTCTTTGCCTATTCTGGATTGGCCCTTTCAGTCTCAGAGCCCAAAAATGTTCCTCTGCTTCCTCATGCTGCTGATGATTCCTTCAGTGTTGGCTATATCCAAATGAAGAGTGCAGAGAACTGTTCTTACTTGGTGGCCATAAGTACAAGCTGTTCTTCACCTAAGATTACAACTGATGAAATCAGTATTGTTTTTGGTGATGCACAAGGCAACCAGGTATATGCAGAAAGACTGGGTGATAGAATTTCAAAGACATTTGAGCAGTGCTCCTCAGACACATTCCAGATAGATGGTGAATGCACTTCTGAGATATGCTTTGCATACCTTCGTAGATCTGGTTCCAAAACCAATGGTTGGAAGCCTGAGAGTGTTAAAATCTACACCTACAACACTGACCCTGTTACTTTCAATTTCAACACCTCCATCCCCAATGACAAATGGTACGGCTACAATTTCTGCCAGGTTCCGCCGCCGCCATCGCCACCTCATCCTCCTTCTCCTCCTACTCCTTCCTCTTCACACCCTCTATACACCCTCAACCGCCTCATCTATGCTGTTCTAGGACTTGTTCTTAGTCAAATTTGGATGTAA 630 0.4349 MNIKEVVFPLLVFFFAYSGLALSVSEPKNVPLLPHAADDSFSVGYIQMKSAENCSYLVAISTSCSSPKITTDEISIVFGDAQGNQVYAERLGDRISKTFEQCSSDTFQIDGECTSEICFAYLRRSGSKTNGWKPESVKIYTYNTDPVTFNFNTSIPNDKWYGYNFCQVPPPPSPPHPPSPPTPSSSHPLYTLNRLIYAVLGLVLSQIWM* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3408 209 PANTHER EMBRYO-SPECIFIC PROTEIN 10 207 - -
Ahy15g3408 209 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 51 163 IPR036392 GO:0005515
Ahy15g3408 209 PANTHER - 10 207 - -
Ahy15g3408 209 Pfam Embryo-specific protein 3, (ATS3) 47 166 IPR010417 -
Ahy15g3408 209 Gene3D PLAT/LH2 domain 51 163 - -
Ahy15g3408 209 CDD PLAT 54 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3408 Ahy-Chr15 156563768 156566194 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3408 - - ahf:112751675 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3408 15 156563768 156566194 Ahy15g3408 15 156563768 156566194 ECH
Ahy15g3408 15 156563768 156566194 Ahy5g1877 5 86937392 86940077 hybridization
Ahy15g3408 15 156563768 156566194 Ahy19g3501 19 157708158 157710054 PCT
Ahy15g3408 15 156563768 156566194 Ahy9g2134 9 110234006 110235932 PCT
Ahy19g3501 19 157708158 157710054 Ahy15g3408 15 156563768 156566194 PCT
Ahy9g2134 9 110234006 110235932 Ahy15g3408 15 156563768 156566194 PCT