Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1254 ATGTGTTGGAACACACAGCTATCTTGTCTTGTCCATAGAAGAAGAAGGGGAAGAAGAAGGAGGAGGAGGAGAAGAAGACAAAGCCAATGCAAACAAATGAACACAAATATGAAAACAAGAACGAAACGAAGCTTCTCAAGCATGGATTTTAGCTGGTGTTTGAGCTTCCCAATCATTGTACATTTTCTTCTTCTTGTTTCTTTGGTTTGTCCTGTTTTATCGTCCTCGTCGTCGCCGCCGTCCACAGAAGTTGGTAATGGTAACGACCCAGTTTCCAATCAAACACTTCGGCCGCAAGAAGAGTTGAAAAAGTTCAATTTCATAAGAAATCATCTTCAAAAGATCAATAAGCCTGCTGTTAAGACAATTGAGAGTCCAGATGGTGATATAATAGACTGTGTTGTAACTCATCAACAACCAGCTTTTGATCATCCTCAATTGAAAGGACAGAAGCCATTGGATGCTCCTGAAAGGCCTGAAGGATATAAGCATGAAGTTGAGGAAAGGAGTGAAGAGTTTCAAGTATGGAGCATGTCTGGAGAATATTGTCCAGAAGGTACAATCCCAATAAGAAGAACAACACAAGAAGATATGCTGAGGGCAAGTTCTGTTTCCACTTTTGGAAGAAAATTAAGAAGCCGTGTTAGAAGGGACACTAACAGCAATGGACATGAGCATGCAGTTGGGTATGTAAATGGAGAAGAATATTATGGAGCGAAAGCAAGTATAAATGTGTGGGCACCAAGAGTGACAAACCAATATGAATTCAGCTTGTCACAAATGTGGGTCATCTCTGGTTCTTTTGGAAATGATCTCAACACCATTGAAGCCGGTTGGCAGGTCAGTCCGGAGCTATACGGAGACAGTTACCCTAGATTCTTTACTTATTGGACGAGTGATGCATATCAAGCAACAGGATGCTACAATTTACTATGCTCAGGATTTGTTCAAACCAACAATAGAATTGCAATTGGAGCTGCAATCTCTCCAACTTCTTCATATCACGGAGGCCAATTTGATATTAGCCTCCTCATTTGGAAGGATCCAAAGCATGGGAACTGGTGGCTGGAATTTGGATCAGGGGTCTTAGTGGGGTACTGGCCATCAGTGTTGTTCACACACCTAAGAAATCATGGAAGCATGGTGCAATTTGGGGGTGAAATTGTGAATTCAAGGCAATCAGGGTATCACACATCAACACAAATGGGAAGTGGTCACTTTGCTGGGGAAGGTTTTGGAAAAGCCTCATACTTTAGGAACATGCAAGTTGTGGATTGGGATAACAATTTGGTTCCTTTGTCAAATCTCAAGGTTCTTGCTGACCACCCTAATTGCTATGACATTCAAGGAGGAATCAATAGGGTTTGGGGGAATTACTTTTATTATGGTGGACCTGGAAGAAATGTCAGATGTCCCTAA 1419 0.4172 MCWNTQLSCLVHRRRRGRRRRRRRRRQSQCKQMNTNMKTRTKRSFSSMDFSWCLSFPIIVHFLLLVSLVCPVLSSSSSPPSTEVGNGNDPVSNQTLRPQEELKKFNFIRNHLQKINKPAVKTIESPDGDIIDCVVTHQQPAFDHPQLKGQKPLDAPERPEGYKHEVEERSEEFQVWSMSGEYCPEGTIPIRRTTQEDMLRASSVSTFGRKLRSRVRRDTNSNGHEHAVGYVNGEEYYGAKASINVWAPRVTNQYEFSLSQMWVISGSFGNDLNTIEAGWQVSPELYGDSYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYHGGQFDISLLIWKDPKHGNWWLEFGSGVLVGYWPSVLFTHLRNHGSMVQFGGEIVNSRQSGYHTSTQMGSGHFAGEGFGKASYFRNMQVVDWDNNLVPLSNLKVLADHPNCYDIQGGINRVWGNYFYYGGPGRNVRCP* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1254 472 MobiDBLite consensus disorder prediction 14 29 - -
Ahy5g1254 472 Pfam Neprosin 254 465 IPR004314 -
Ahy5g1254 472 MobiDBLite consensus disorder prediction 14 41 - -
Ahy5g1254 472 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 47 472 - -
Ahy5g1254 472 Pfam Neprosin activation peptide 122 230 IPR025521 -
Ahy5g1254 472 Gene3D - 246 364 - -
Ahy5g1254 472 PANTHER - 47 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1254 Ahy-Chr5 34018939 34023519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1254 - - gmx:100776639 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1254 5 34018939 34023519 Ahy15g1373 15 23409803 23414586 PCT
Ahy5g1254 5 34018939 34023519 Ahy3g3393 3 132664310 132669338 PCT
Ahy15g1373 15 23409803 23414586 Ahy5g1254 5 34018939 34023519 PCT
Ahy3g3393 3 132664310 132669338 Ahy5g1254 5 34018939 34023519 PCT