Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1373 ATGTGTTGGAACACACAGCTATCTTGTCTTGTCCATAGAAGAAGAAGGGGAAGAAGAAGAAGGAGGAGGAGAAGAAGACAAAGCCAATGCAAACAAATGAACACAAATATGAAAACAAGAACAAAACGAAGCTTCTCAAGCATGGATTTTAGCTGGTGTTTGAGCTTCCCAATCATTGTACATTTTCTTCTTCTTGTTTCTTTGGTTTGTCCTGTTTTATCGTCCTCGTCGTCATCGCCGCCGTCCACAGAAGTTGGTAATGGTAATGACCCAGTTGCCAATCAAACACTTCGGCCGCAAGAAGAGTTGAAAAAGTTCAATTTCATAAGAAATCATCTTCAAAAGATCAATAAGCCTGCTGTTAAGACAATTCAGAGTCCAGATGGTGATATAATAGACTGTGTTGTAACTCATCAACAACCAGCTTTTGATCATCCTCAATTGAAAGGACAGAAGCCATTGGATCCTCCTGAAAGGCCTGAAGGATATAAGCATGAAGTTGAGGAAAGGAGTGAAGAGTTTCAAGTATGGAGCATGTCTGGAGAATATTGTCCAGAAGGTACAATCCCAATAAGAAGAACAACACAAGAAGATATACTGAGGGCAAGTTCTGTTTCCACTTTTGGAAGAAAATTAAGAAGCCGTGTTAGAAGGGACACTAACAGCAATGGACATGAGCATGCAGTTGGGTATGTAAGTGGAGAAGAATATTATGGAGCGAAAGCAAGTATAAATGTGTGGGCACCAAGAGTGACAAACCAATATGAATTCAGCTTGTCACAAATGTGGGTCATCTCTGGTTCTTTTGGCAATGATCTCAACACCATTGAAGCTGGTTGGCAGGTCAGTCCGGAGCTATACGGGGACAGTTACCCTAGATTCTTTACTTATTGGACGAGTGATGCATATCAAGCAACAGGATGCTACAATTTACTATGCTCAGGATTTGTTCAAACCAACAATAGAATTGCAATTGGAGCTGCAATCTCTCCAACTTCTTCATATCACGGAGGCCAATTTGATATTAGCCTCCTCATTTGGAAGGATCCAAAGCATGGGAACTGGTGGCTGGAATTTGGATCAGGGATCTTAGTGGGGTACTGGCCAGCAGTGTTGTTCACACACCTAAGAAATCATGGAAGCATGGTGCAATTTGGGGGTGAAATTGTGAATTCAAGGCAATCAGGGTATCACACTTCAACACAAATGGGAAGTGGTCACTTTGCTGGGGAAGGTTTTGGAAAAGCCTCATACTTTAGGAACATGCAAGTTGTGGATTGGGATAACAATTTGGTTCCTTTGTCAAATCTCAAGGTTCTTGCTGACCACCCTAATTGCTATGACATTCAAGGAGGAATCAATAGGGTTTGGGGGAATTACTTTTATTATGGTGGACCTGGAAGAAATGTCAGATGTCCCTAA 1422 0.4163 MCWNTQLSCLVHRRRRGRRRRRRRRRQSQCKQMNTNMKTRTKRSFSSMDFSWCLSFPIIVHFLLLVSLVCPVLSSSSSSPPSTEVGNGNDPVANQTLRPQEELKKFNFIRNHLQKINKPAVKTIQSPDGDIIDCVVTHQQPAFDHPQLKGQKPLDPPERPEGYKHEVEERSEEFQVWSMSGEYCPEGTIPIRRTTQEDILRASSVSTFGRKLRSRVRRDTNSNGHEHAVGYVSGEEYYGAKASINVWAPRVTNQYEFSLSQMWVISGSFGNDLNTIEAGWQVSPELYGDSYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYHGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPAVLFTHLRNHGSMVQFGGEIVNSRQSGYHTSTQMGSGHFAGEGFGKASYFRNMQVVDWDNNLVPLSNLKVLADHPNCYDIQGGINRVWGNYFYYGGPGRNVRCP* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1373 473 MobiDBLite consensus disorder prediction 14 29 - -
Ahy15g1373 473 Pfam Neprosin activation peptide 123 231 IPR025521 -
Ahy15g1373 473 MobiDBLite consensus disorder prediction 14 41 - -
Ahy15g1373 473 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 47 473 - -
Ahy15g1373 473 Gene3D - 247 361 - -
Ahy15g1373 473 MobiDBLite consensus disorder prediction 142 162 - -
Ahy15g1373 473 Pfam Neprosin 255 466 IPR004314 -
Ahy15g1373 473 PANTHER - 47 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1373 Ahy-Chr15 23409803 23414586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1373 - - gmx:100776639 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1373 15 23409803 23414586 Ahy15g1373 15 23409803 23414586 ECH
Ahy15g1373 15 23409803 23414586 Ahy3g3393 3 132664310 132669338 hybridization
Ahy5g1254 5 34018939 34023519 Ahy15g1373 15 23409803 23414586 PCT
Ahy15g1373 15 23409803 23414586 Ahy5g1254 5 34018939 34023519 PCT