Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3393 ATGTCAACAACAATCCTAGTACCTTTTCTTCTTCTTCTTCTTATGGTTTGTCATGTGGCATGTTCTTTTGAAAATCAAACCTTTAGGCCATTGGAGGAGCTACGCAAGTTGAGAACCATAAGAAACCATCTTCAGCAAATCAACAAACCAAGTGTTAAAACAATTCAGAGTCCTGATGGTGATATCATAGATTGTGTTGTGTCTCATAGGCAACCAGCTTTTGATCATCCTCTATTGAGAGGCCAGAAACCATTGGATCCACCAGAAAGGCCAAAGGGACATAAGAGTAAGAGTGAAAAAATGAGTGAGAATTTTCAAGTGTGGAGCTTCTCTGGGGAATCATGTCCAGAAGGAACAATTCCAATCAGAAGAACAACAGAAAATGACTTATTAAGAGCTTCCTCTGTTACCACCTTTGGAAGAAAATTAATCACTTCCTTTAGAAGGGATACAACTGGTGATGGACATGAGCATGCAGTAGGGTATGTTAGTGGAGATGAATACTATGGAGCAAAAGCAAGCATAAATGTGTGGGCACCTCTTGTAGAAAACCAATATGAATTCAGCTTATCTCAAATTTGGGTCATTTCTGGTTCTTTTGGGGATGATCTTAACACCATTGAAGCTGGTTGGCAGGTCAGCCCTGAGCTCTATGGGGACAGCTTTCCAAGATTCTTTACTTATTGGACGACTGATGCATACCAAGCAACCGGCTGTTACAATTTGCTTTGCTCTGGCTTTGTTCAAGTTAACAATAAAATTGCAATTGGGGCCGCAATCTCTCCAACTTCTTCATATAGCGGTGGACAATTTGATATTAGTTTACTCATTTGGAAGGATCCAAAGCATGGGAATTGGTGGCTTGAATTTGGGTCAGGGGTGTTAGTAGGGTACTGGCCATCATTCTTGTTCTCACACTTAGGGGACCATGCAAGCATGGTTCAATTTGGGGGTGAAGTTGTAAATTCAAGGTCTTCAGGGTCTCACACAAGCACCCAAATGGGAAGTGGACATTTTGCTGAGGAGGGGTTTGCAAAAGCTTCATACTTTAGGAATTTGCAAGTTGTGGATTGGGATAACAATTTGATTCCATTGAACAATCTCAAGGTTTTAGCAGATCACCCAAATTGCTATGATATACAAGGAGGCATTAATAATGTTTGGGGGAATTACTTTTACTATGGTGGTCCTGGAAGAAACATCAAGTGTCCCTAA 1215 0.4082 MSTTILVPFLLLLLMVCHVACSFENQTFRPLEELRKLRTIRNHLQQINKPSVKTIQSPDGDIIDCVVSHRQPAFDHPLLRGQKPLDPPERPKGHKSKSEKMSENFQVWSFSGESCPEGTIPIRRTTENDLLRASSVTTFGRKLITSFRRDTTGDGHEHAVGYVSGDEYYGAKASINVWAPLVENQYEFSLSQIWVISGSFGDDLNTIEAGWQVSPELYGDSFPRFFTYWTTDAYQATGCYNLLCSGFVQVNNKIAIGAAISPTSSYSGGQFDISLLIWKDPKHGNWWLEFGSGVLVGYWPSFLFSHLGDHASMVQFGGEVVNSRSSGSHTSTQMGSGHFAEEGFAKASYFRNLQVVDWDNNLIPLNNLKVLADHPNCYDIQGGINNVWGNYFYYGGPGRNIKCP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3393 404 PANTHER - 27 404 - -
Ahy3g3393 404 Pfam Neprosin 186 397 IPR004314 -
Ahy3g3393 404 Gene3D - 180 297 - -
Ahy3g3393 404 Pfam Neprosin activation peptide 54 162 IPR025521 -
Ahy3g3393 404 MobiDBLite consensus disorder prediction 76 101 - -
Ahy3g3393 404 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 27 404 - -
Ahy3g3393 404 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3393 Ahy-Chr3 132664310 132669338 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3393 - - gmx:100792240 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1373 15 23409803 23414586 Ahy3g3393 3 132664310 132669338 hybridization
Ahy5g1254 5 34018939 34023519 Ahy3g3393 3 132664310 132669338 PCT
Ahy3g3393 3 132664310 132669338 Ahy5g1254 5 34018939 34023519 PCT