Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2513 ATGACCAAGATCTCTGTATTGCTCCTATGTCTCTTCTTCTTCTCAGCTTCAGGGCTTGTGAATGGTTCTTCCAAGCATCAAAAGATTGGGGTTTTTGAGCTCAAGAAAGGTGACCTTTCTTTGAAGGTTACCAATTGGGGTGCAACAATTTTGTCTCTCACCCTTCCTGATAAGAATGGAAAGTTGGGTGATGTTATTCTTGGATATAAGTCAATCAAGGATTACACTAATGGTACAACTTACTTTGGTGCTACTGTTGGGCGAGTTGCAAACAGAATTGGAGGAGCTCAGTTTACTCTAAACGGAGTCCATTACAAATTAGTTGCTAATGAAGGAAACAATACACTTCATGGTGGAACCAGAGGATTCAGTGATGTTCTTTGGAAAGTGGAAAGCTACAAAAGAGATGCCAAGAACCCAAGTATTACCTTCAGTTACTATAGTTTTGATGGTGAAGAAGGATTCCCTGGTGATCTCATAGTTACTGTGAGCTACATTCTAAGTAGGAAAAACCATTTGGCCATAGTGATGAAAGCAAAAGCATTAAACAAAGCTACCCCAGTGAACTTAGCCAACCATGCTTATTGGAACCTAGGAGGTCAAAACAGTGGCAACATTCTTGACGAGGTTGTCCAAATCTTTGGTTCAAAGATCACAGTTGTTGATAGCAAACTCATTCCCACAGGAAAATTTGCTTCAGTGAAAGGAACACCCTATGATTTTCTCAAGCCACAAGTTGTTGGAAGCAGGATTAACAAGCTAGCTTCAACAAAAGGCTATGACATCAACTATGTTCTTGATAGTGAGAAGAAAATCAAGCTAGCAGCAATAGTTAAGGATCATAAATCAGGCAGGGTGTTGGAACTTTACACAAATGCCCCTGGTTTGCAGTTTTATACCGGGAACTACCTTAGTAATTTGAAGGGTAAAGGTGGATATGTGTATCAATCTCATGCTGGATTGTGTTTGGAGAGTCAAGCTTTTCCTGATTCAGTGAATCACCCAAATTTCCCTTCAACTATTGTCACCCCTCAAAAGCCTTACAAGCATTTTATGCTCTTTAAATTTTCCACATATTAG 1080 0.3972 MTKISVLLLCLFFFSASGLVNGSSKHQKIGVFELKKGDLSLKVTNWGATILSLTLPDKNGKLGDVILGYKSIKDYTNGTTYFGATVGRVANRIGGAQFTLNGVHYKLVANEGNNTLHGGTRGFSDVLWKVESYKRDAKNPSITFSYYSFDGEEGFPGDLIVTVSYILSRKNHLAIVMKAKALNKATPVNLANHAYWNLGGQNSGNILDEVVQIFGSKITVVDSKLIPTGKFASVKGTPYDFLKPQVVGSRINKLASTKGYDINYVLDSEKKIKLAAIVKDHKSGRVLELYTNAPGLQFYTGNYLSNLKGKGGYVYQSHAGLCLESQAFPDSVNHPNFPSTIVTPQKPYKHFMLFKFSTY* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2513 359 PIRSF GALM 16 359 IPR015443 GO:0016853|GO:0019318
Ahy4g2513 359 Gene3D - 20 358 IPR014718 GO:0030246
Ahy4g2513 359 PANTHER ALDOSE 1-EPIMERASE 1 358 - -
Ahy4g2513 359 Pfam Aldose 1-epimerase 32 354 IPR008183 GO:0005975|GO:0016853
Ahy4g2513 359 SUPERFAMILY Galactose mutarotase-like 25 357 IPR011013 GO:0003824|GO:0005975|GO:0030246
Ahy4g2513 359 PANTHER ALDOSE-1-EPIMERASE 1 358 - -
Ahy4g2513 359 CDD galactose_mutarotase_like 32 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2513 Ahy-Chr4 122784590 122789915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2513 27 357 Miscellaneous Gene Families AT5G15140 58.258 6.03e-137 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2513 K01785 - gmx:100798975 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2862 14 137118398 137123772 Ahy4g2513 4 122784590 122789915 hybridization
Ahy20g2524 20 133037687 133043717 Ahy4g2513 4 122784590 122789915 PCT
Ahy10g2039 10 107903321 107907023 Ahy4g2513 4 122784590 122789915 PCT
Ahy4g2513 4 122784590 122789915 Ahy20g2524 20 133037687 133043717 PCT
Ahy4g2513 4 122784590 122789915 Ahy10g2039 10 107903321 107907023 PCT