Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2039 ATGAGCAAGTTCTTAGTGATATTATATGTTGTATGGTTAGCTGCTTCTGGGTATGTTAATGGATCTATCATCAAGAAGGAGAAAGACCAAATTAGGGTCTTTGAATTAAAGAAGGGTGACCTTACTTTGAAGGTCACTAACTGGGGTGCCACACTTGTTTCCTTAGTACTCCCGGACAAATATGGAAAGTTGGGAGACATTCTTCTTGGATATGATTCTCCCGAGGCATACACTAACGATACAACATATTTTGGAGCTACTATTGGCAGAGTTGCTAACAGAATTGGAGGAGCTCAGTTTACATTAAATGGAATCCATTACAAATTAATTGCTAATGAAGGAAACAATACACTTCATGGTGGACCTAGAGGATTTAGTGATGTGCTTTGGAAAGTGATAAAGTATCAAAGAGACGGTGATAGACCCATAATCAAATTCAGCTACCACAGTTTTGATGGTGAAGAAGGATTTCCGGGTGACGTATTGGTAACGGTGAGCTACATCCTAAGTGAAGAATGGAGTTTGAGCATAGTCATGAAAGCAAAAGCCTTAAACAAAGCAACACCAGTGAGCCTGGTTAACCATGCATATTGGAACCTAGGAAACCACAACAGCGGCAACATCCTTAACCAAGTTGTTCAAATCTTCGGATCCAAATTCACACCGGTCGATGACAACCTCATTCCCACTGGAAACTTCTCGTCCGTCCAAGGAACCCCATACGATTTCCTTAAGCCACAAGTTGTTGGCTCTAGGATTGACCAGTTATCCAAGACCAATGGCTATGACATAAATTATGTTCTTGACAATGACGAGGATGAGATTAGGGTTGCGGCTATTGTGACGGATAAGAGGTCAGGGAGAGTGATGAAGATTGCGACGAATCAACCGGGTTTGCAATTCTACACTGCGAATTATGTGAAGAATGAGAAGGGGAAAGACGGGTTTGTGTATCAGCCACGATCGGCGTTGTGTTTGGAGACTCAAGCGTTCCCTGACTCCGTCAACCATCCCAATTTTCCGTCAACTATTGTCACGCCGGAAAAGCCTTACAACCATCTTCTCTTCTTCAAATTCTCCACTACCCATGCTCCACATGGTTTTTTATTATTACTATTTGCATAA 1125 0.4204 MSKFLVILYVVWLAASGYVNGSIIKKEKDQIRVFELKKGDLTLKVTNWGATLVSLVLPDKYGKLGDILLGYDSPEAYTNDTTYFGATIGRVANRIGGAQFTLNGIHYKLIANEGNNTLHGGPRGFSDVLWKVIKYQRDGDRPIIKFSYHSFDGEEGFPGDVLVTVSYILSEEWSLSIVMKAKALNKATPVSLVNHAYWNLGNHNSGNILNQVVQIFGSKFTPVDDNLIPTGNFSSVQGTPYDFLKPQVVGSRIDQLSKTNGYDINYVLDNDEDEIRVAAIVTDKRSGRVMKIATNQPGLQFYTANYVKNEKGKDGFVYQPRSALCLETQAFPDSVNHPNFPSTIVTPEKPYNHLLFFKFSTTHAPHGFLLLLFA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2039 374 CDD galactose_mutarotase_like 34 359 - -
Ahy10g2039 374 Gene3D - 22 362 IPR014718 GO:0030246
Ahy10g2039 374 PANTHER ALDOSE 1-EPIMERASE 1 362 - -
Ahy10g2039 374 SUPERFAMILY Galactose mutarotase-like 26 360 IPR011013 GO:0003824|GO:0005975|GO:0030246
Ahy10g2039 374 Pfam Aldose 1-epimerase 33 353 IPR008183 GO:0005975|GO:0016853
Ahy10g2039 374 PIRSF GALM 19 362 IPR015443 GO:0016853|GO:0019318
Ahy10g2039 374 PANTHER ALDOSE-1-EPIMERASE 1 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2039 Ahy-Chr10 107903321 107907023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2039 27 360 Miscellaneous Gene Families AT5G15140 55.090 8.42e-134 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2039 K01785 - gmx:100779602 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2524 20 133037687 133043717 Ahy10g2039 10 107903321 107907023 hybridization
Ahy10g2039 10 107903321 107907023 Ahy14g2862 14 137118398 137123772 PCT
Ahy10g2039 10 107903321 107907023 Ahy4g2513 4 122784590 122789915 PCT
Ahy14g2862 14 137118398 137123772 Ahy10g2039 10 107903321 107907023 PCT
Ahy4g2513 4 122784590 122789915 Ahy10g2039 10 107903321 107907023 PCT