Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2176 ATGTTTTCATTTTCAGTTGAAGGAACTGTGTGGTGCTGTGTGTTAATGGTTATTATAACTGTGAGTTTTGCTGGGGATATAGTACACCCTGATAATATTGCTCCCAAGAGACCTGGTTGTGATAACAACTTTGTTCTGGTTAAAGTCCCAACTTGGATTAATGGTGTGGAGAACTGTGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCTAAAGAAAAACATGCCACCCATACTAGAGTCGCCATTGCGGACCCTCCTGATTGTTGTAGCAAGCCGAAGAATAAGCTTATTGGCGAGATCATTTTGGTGCACCGAGGACAATGTAGTTTCACAACCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCGATCCTCATTATAAATAATCGGACAGAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACTGATATTGATATTGGAATTCCTGCTGTGATGCTTCCACAAGATGCTGGTGAAAACATTAAAAGTCATATACAAAACAAATCGATAGTGTCTGTGCAGTTATACTCTCCGCTGCGCCCATTAGTTGATGTAGCGGAAGTGTTTTTATGGCTTATGGCTGTTGGTACCATTCTCTGTGCTTCTTATTGGTCTGCCTGGACAACCAGAGAGGCTGCTGTTGAGCGGGAGAAGCTATTAAAGGATGCTTCGGATGAATATTTGAATACTGAGAATGCTGGTTCTACTGGTTATGTAGAAATCAGTACCATGGCAGCAATTTCTTTTGTTGTGATCGCTTCTTGTTTCTTGCTTATGCTTTACAAATTAATGGCATCCTGGTTTATTGAAGTTCTGGTGGTTCTATTTTGCATTGGTGGTGTTGAGGGACTGCAAACTTGCTTGGTGGCTCTGTTATCATGTTTCAGATGGTTTCAACATGCTGGGCAAACATTTGTAAAAATACCCTTCTTTGGAGCTGTCTCATATTTGACGCTTGCTATGACTCCCTTCTGCATAGTATTTGCCGTGCTTTGGGGAGTTTTTCGACACGTATCTTTTGCATGGATTGGACAAGATATTCTTGGAATTGCATTGATAATTACGGTTCTTCAGATTGTCCGCATACCAAATCTCAAGGTTGGAACTGTTCTTCTTAGTTGCGCCTTTCTATATGACATCTTCTGGGTGTTTGTCTCTAAGTGGTGGTTCCATGAGAGCGTAATGATAGTGGTAGCTCGAGGCGATAGGAGTGGAGAAGATGGTATCCCCATGCTGCTTAAAATACCGCGTCTGTTTGATCCTTGGGGTGGTTACAGCATAATTGGTTTTGGGGACATAATCTTACCAGGGCTTCTAGTGGCATTTTCACTAAGGTATGATTGGCTGGCAAAGAGGAACCTTCGGTCTGGATACTTCGTGTGGGCAATGAGTGCTTACGGTTTAGGTCTCCTTATCACATATGTTGCTTTGAACTTGATGGATGGGCATGGTCAACCAGCATTGCTTTATATCGTCCCGTTTACTCTTGGCACATTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGCTTTTATGGACAAGAGGGGAACCAGAAATGCCTTGCCCTCATAACCAAGAGTCTCAATAA 1608 0.4223 MFSFSVEGTVWCCVLMVIITVSFAGDIVHPDNIAPKRPGCDNNFVLVKVPTWINGVENCEYVGVGARFGPTLESKEKHATHTRVAIADPPDCCSKPKNKLIGEIILVHRGQCSFTTKANIAEEAGASAILIINNRTELFKMVCEENETDIDIGIPAVMLPQDAGENIKSHIQNKSIVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTTREAAVEREKLLKDASDEYLNTENAGSTGYVEISTMAAISFVVIASCFLLMLYKLMASWFIEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAGQTFVKIPFFGAVSYLTLAMTPFCIVFAVLWGVFRHVSFAWIGQDILGIALIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDRSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKRNLRSGYFVWAMSAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKLLWTRGEPEMPCPHNQESQ* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2176 535 Pfam PA domain 90 167 IPR003137 -
Ahy4g2176 535 SUPERFAMILY PA domain 102 139 IPR046450 -
Ahy4g2176 535 Pfam Signal peptide peptidase 244 523 IPR007369 GO:0004190|GO:0016021
Ahy4g2176 535 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 12 534 - -
Ahy4g2176 535 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016021
Ahy4g2176 535 PANTHER SIGNAL PEPTIDE PEPTIDASE 12 534 IPR007369 GO:0004190|GO:0016021
Ahy4g2176 535 Gene3D - 41 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2176 Ahy-Chr4 116926369 116932092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2176 41 181 Miscellaneous Gene Families AT2G30290 30.667 3.15e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2176 K09597 - gmx:100808921 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2445 14 129163051 129168776 Ahy4g2176 4 116926369 116932092 hybridization
Ahy4g2176 4 116926369 116932092 Ahy12g0065 12 1630757 1637147 PCT
Ahy4g2176 4 116926369 116932092 Ahy2g0027 2 278185 285197 PCT
Ahy12g0065 12 1630757 1637147 Ahy4g2176 4 116926369 116932092 PCT
Ahy2g0027 2 278185 285197 Ahy4g2176 4 116926369 116932092 PCT