Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0065 ATGGTTCTTCCACATGGTGTGTTCCTTCTCTTCTTCATGCTCTCTTCTGCAACTTTGGCTTTGGCTGGAGACATAGTTCACCATGATGATGTTGCTCCAAGAAGACCTGGTTGTGAGAACAACTTTGTTCTGGTCAAAGTCCCCACTTGGATTGATGGTGTTGAAAACAGTGAGTATGTAGGTGTTGGTGCAAGATTCGGCCCTACGTTGGAGTCAAAAGAGAAACGTGCCAACCACACTAGAGTTGTCATGGCTGACCCTCCTGATTGTTGTTCCAAGCCTAAGAATAAGCTCACTAGCGAGATCATTGTGGTGCAACGAGGAAAATGTAGTTTCACAACCAAGGCAAATATAGCTGAGGAAGCTGGTGCTTCAGCCATCCTCATTATAAATTATAGGACAGAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACCGATGTTGATATTGGTATACCCGCTGTCATGCTTCCACAATATGCTGGATTAAACATAGAAAAACATATAAAAAACAACTCCACAGTGTCCGTGCAGTTATACTCTCCGCTGCGTCCATTGGTTGATGTTGCGGAAGTATTTCTATGGCTTATGGCCGTTGGAACCATTTTATGTGCTTCTTATTGGTCTGCTTGGACTGCTAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCGGATGAATACCTTAGCACACAGAATGTTGGTTCAAGTGGTTATGTGGAAATCAGTACCGTGGCTGCAATTTTATTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTTTACAAGTTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTATTCTGCATTGGGGGAGTAGAGGGACTGCAAACTTGTTTGGTGGCTCTTTTATCATGTTTCAGATGGTTTCAACATGCTGCACAAACATTTGTGAAAATTCCCTTCTTTGGAGCCGTCTCATATCTGACATTTGCCGTTACCCCCTTTTGCATAGTGTTCGCTGTGATATGGGCAGTTTATCGTCGTGCTTCGTTTGCTTGGATCGGTCAAGACATTCTTGGTATCACACTGATAATTACAGTTCTTCAGATTGTACGGATACCGAATCTCAAGGTTGGAACTGTTCTTCTCAGCTGCGCCTTCCTATACGACATCTTTTGGGTGTTCGTTTCTAAACGGTGGTTCCATGAGAGCGTCATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCAATGCTGCTAAAGATACCACGTTTGTTCGATCCTTGGGGTGGTTACAGCATCATCGGTTTTGGGGACATTATCTTACCAGGGCTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAGCCTTCGTGCTGGGTACTTCTTGTGGGCAATGACTGCCTATGGCTTGGGTCTCCTCATCACATACGTGGCTTTGAACTTGATGGATGGACATGGCCAACCAGCTTTGCTTTATATAGTCCCCTTCACACTTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGATTTTATGGACAAGGGGAGAACCAGAGAGACCTTGCCCTCACATGCAAGAAGAGGATCAACAATCACTTAACCAGCATTGA 1623 0.4362 MVLPHGVFLLFFMLSSATLALAGDIVHHDDVAPRRPGCENNFVLVKVPTWIDGVENSEYVGVGARFGPTLESKEKRANHTRVVMADPPDCCSKPKNKLTSEIIVVQRGKCSFTTKANIAEEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQYAGLNIEKHIKNNSTVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAIEQEKLLKDASDEYLSTQNVGSSGYVEISTVAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAAQTFVKIPFFGAVSYLTFAVTPFCIVFAVIWAVYRRASFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKRWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKSLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCPHMQEEDQQSLNQH* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0065 540 Pfam Signal peptide peptidase 242 521 IPR007369 GO:0004190|GO:0016021
Ahy12g0065 540 SMART psh_8 241 510 IPR006639 GO:0004190|GO:0016021
Ahy12g0065 540 Pfam PA domain 88 164 IPR003137 -
Ahy12g0065 540 SUPERFAMILY PA domain 98 136 IPR046450 -
Ahy12g0065 540 Gene3D - 38 182 - -
Ahy12g0065 540 PANTHER SIGNAL PEPTIDE PEPTIDASE 10 539 IPR007369 GO:0004190|GO:0016021
Ahy12g0065 540 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 10 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0065 Ahy-Chr12 1630757 1637147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0065 K09597 - gmx:100795197 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0065 12 1630757 1637147 Ahy12g0065 12 1630757 1637147 ECH
Ahy12g0065 12 1630757 1637147 Ahy2g0027 2 278185 285197 hybridization
Ahy14g2445 14 129163051 129168776 Ahy12g0065 12 1630757 1637147 PCT
Ahy4g2176 4 116926369 116932092 Ahy12g0065 12 1630757 1637147 PCT
Ahy12g0065 12 1630757 1637147 Ahy14g2445 14 129163051 129168776 PCT
Ahy12g0065 12 1630757 1637147 Ahy4g2176 4 116926369 116932092 PCT