Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0027 ATGGTTCTTCCACATGGTGTGTTCCTTCTCTTCATGCTCTCTTCTGCAACTTTGGCTTTGGCTGGAGACATAGTTCACCATGATGATGTTGCTCCAAGAAGACCTGGCTGTGAGAACAACTTTGTTCTGGTCAAAGTCCCCACTTGGATTGATGGTGTTGAAAACAGTGAGTATGTAGGTGTTGGTGCAAGATTCGGCCCTACTTTGGAGTCAAAAGAGAAACGTGCCAACCACACTAGAGTTGTCATGGCTGACCCTCCTGATTGTTGTTCCAAGCCTAAGAATAAGCTCACTAGCGAGATCATTGTGGTGCAACGAGGAAAATGTAGTTTCACAACCAAGGCAAATATAGCTGAGGAAGCTGGTGCTTCAGCCATCCTCATTATAAATTATAGGACAGAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACCGATGTTGATATTGGTATACCCGCTGTCATGCTTCCACAATATGCTGGATTAAACATAGAAAAACATATAAAAAACAACTCCACAGTGTCCGTGCAGTTATACTCTCCGCTGCGTCCATTGGTTGATGTTGCGGAAGTGTTTCTATGGCTTATGGCCGTTGGAACCATTTTATGTGCTTCTTATTGGTCTGCTTGGACTGCTAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCGGATGAATACCTTAGCACACAGAATGTTGGTTCAAGTGGTTATGTGGAAATCAGTACCGTGGCTGCAATTTTATTTGTTGTGATCGCTTCTTGTTTCCTGGTTATGCTTTACAAGTTAATGTCCTTCTGGTTTGTTGAAGTTCTGGTGGTTCTATTCTGCATTGGGGGAGTAGAGGGACTGCAAACTTGTTTGGTGGCTCTTTTATCATGTTTCAGATGGTTCCAACATGCTGCACAAACATTTGTGAAAATTCCCTTCTTTGGAGCCGTCTCATATCTGACATTTGCCGTTACCCCCTTTTGCATAGTGTTCGCTGTGATATGGGCAGTTTATCGTCGTGCTTCGTTTGCTTGGATCGGTCAAGACATCCTTGGTATCACACTGATAATTACAGTTCTTCAGATTGTACGGATACCGAATCTCAAGGTTGGAACTGTTCTTCTCAGCTGCGCCTTCCTATACGACATCTTTTGGGTGTTCGTTTCTAAACGGTGGTTCCATGAGAGCGTCATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCAATGCTACTAAAGATACCACGTTTGTTCGATCCTTGGGGTGGTTACAGCATCATCGGTTTTGGGGACATTATCTTACCAGGGCTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAGCCTTCGCGCTGGGTACTTCTTGTGGGCAATGACTGCCTATGGCTTAGGTCTCCTCATCACATACGTGGCTTTGAACTTGATGGATGGACATGGCCAACCAGCTTTGCTTTATATAGTTCCCTTCACACTTGGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGATTTTATGGACAAGGGGGGAACCAGAGAGACCTTGCCCTCACATGCAAGAAGAGGATCAACAATCACTTAACCAGCATTGA 1620 0.4401 MVLPHGVFLLFMLSSATLALAGDIVHHDDVAPRRPGCENNFVLVKVPTWIDGVENSEYVGVGARFGPTLESKEKRANHTRVVMADPPDCCSKPKNKLTSEIIVVQRGKCSFTTKANIAEEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQYAGLNIEKHIKNNSTVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAIEQEKLLKDASDEYLSTQNVGSSGYVEISTVAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAAQTFVKIPFFGAVSYLTFAVTPFCIVFAVIWAVYRRASFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKRWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKSLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCPHMQEEDQQSLNQH* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0027 539 Gene3D - 37 181 - -
Ahy2g0027 539 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 5 538 - -
Ahy2g0027 539 Pfam PA domain 87 163 IPR003137 -
Ahy2g0027 539 SUPERFAMILY PA domain 97 135 IPR046450 -
Ahy2g0027 539 SMART psh_8 240 509 IPR006639 GO:0004190|GO:0016021
Ahy2g0027 539 Pfam Signal peptide peptidase 241 520 IPR007369 GO:0004190|GO:0016021
Ahy2g0027 539 PANTHER SIGNAL PEPTIDE PEPTIDASE 5 538 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0027 Ahy-Chr2 278185 285197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0027 K09597 - gmx:100795197 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0065 12 1630757 1637147 Ahy2g0027 2 278185 285197 hybridization
Ahy14g2445 14 129163051 129168776 Ahy2g0027 2 278185 285197 PCT
Ahy4g2176 4 116926369 116932092 Ahy2g0027 2 278185 285197 PCT
Ahy2g0027 2 278185 285197 Ahy14g2445 14 129163051 129168776 PCT
Ahy2g0027 2 278185 285197 Ahy4g2176 4 116926369 116932092 PCT