Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1973 ATGACTGCGTCTGAGAACGCTCTAACTTTATTAAACAAACACGGAAAGTGGAAAGCAGGAAATTGTCTTTACAACTACTGCCATTTCTTCCACTTTCATCAACATTTATTTCACTCACACGCTTCAAACGACGTCGTTTTGCTTAACATTCTCATGGCCCTCTTGAAGACCTCCACCACTCTCTCCTTCAGAGCAACCGCTTTTCCGCTCCATGGCCATACCACCAACACCAGGAAGTTGCATTGGAAGCCTACTCAAGCAGCTTTGACATCCAGTTTCCACCTTCCTATGCGTAGCTTTGAGGCTAAGAACAGGACTTCCACAGATGACGTAAAACGTCTGAGATTGATAACTGCCATTAAGACACCATACCTACCCGATGGTCGCTTTGATCTTGAAGCATATGATACCCTAGTAAATTTGCAGATTGAAAATGGAGTTGAAGGTGTCATTGTTGGTGGCACAACTGGAGAAGGCCAATTAATGAGCTGGGATGAACACATAATGCTTATTGGGCACACAGTCAACTGTTTCGGAGTGAAAATCAAGGTTATAGGAAACACCGGAAGCAACTCAACAAGGGAAGCAATCCATGCCACAGAGCAGGGTTTTGCTGTTGGGATGCACGCTGCCCTTCACATAAACCCTTACTACGGCAAAACTTCCTTGAATGGTTTGATTTCTCATTTCAATACCGTGCTTCCGATGGGCCCTACCATCATATACAATGTGCCTTCAAGGACCAGTCAAGACATTCCTCCACAGGTGATTCAAACCTTAGCACAGAGTGCGAGTTTAGCCGGTGTCAAGGAATGTATGGGAAATGACAGGATCAAACAATATACAGATAATGGCATTGTTGTGTGGAGCGGAAATGATGACCAATGCCATGATGCTAGATGGGGTTACGGAGCAACAGGAGTGATATCTGTCGCAAGCAACCTGGTTCCCGGTTTAATGCGAGAACTCATAATTGGTGGTGAGAATCCGGCGCTGAATTCTAAGCTCATGCCTCTTGTTGAATGGCTTTTTTGCGAGCCAAACCCCATCGGTTTGAACACAGCTCTTGCTCAACTCGGAGTTGCTCGGCCGGTTTTCAGGTTACCATATGTACCTCTCCCTTTGAAGAAGCGGATGGAATTTGTCAATTTGGTGAAGGGAATCGGTCGAGAGCACTTTATTGGAGACAAAGATGTTCAGGTTCTTGATGATAATGACTTTATCTTAATTGGTCGTCATTAA 1242 0.4485 MTASENALTLLNKHGKWKAGNCLYNYCHFFHFHQHLFHSHASNDVVLLNILMALLKTSTTLSFRATAFPLHGHTTNTRKLHWKPTQAALTSSFHLPMRSFEAKNRTSTDDVKRLRLITAIKTPYLPDGRFDLEAYDTLVNLQIENGVEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGVKIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLNGLISHFNTVLPMGPTIIYNVPSRTSQDIPPQVIQTLAQSASLAGVKECMGNDRIKQYTDNGIVVWSGNDDQCHDARWGYGATGVISVASNLVPGLMRELIIGGENPALNSKLMPLVEWLFCEPNPIGLNTALAQLGVARPVFRLPYVPLPLKKRMEFVNLVKGIGREHFIGDKDVQVLDDNDFILIGRH* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1973 413 PRINTS Dihydrodipicolinate synthase signature 237 254 IPR002220 GO:0016829
Ahy4g1973 413 PRINTS Dihydrodipicolinate synthase signature 214 230 IPR002220 GO:0016829
Ahy4g1973 413 PRINTS Dihydrodipicolinate synthase signature 146 167 IPR002220 GO:0016829
Ahy4g1973 413 PRINTS Dihydrodipicolinate synthase signature 182 200 IPR002220 GO:0016829
Ahy4g1973 413 TIGRFAM dapA: 4-hydroxy-tetrahydrodipicolinate synthase 116 380 IPR005263 GO:0008840|GO:0009089
Ahy4g1973 413 Pfam Dihydrodipicolinate synthetase family 115 386 IPR002220 GO:0016829
Ahy4g1973 413 ProSitePatterns Dihydrodipicolinate synthase signature 2. 242 272 IPR020625 GO:0016829
Ahy4g1973 413 CDD DHDPS 115 385 IPR005263 GO:0008840|GO:0009089
Ahy4g1973 413 Gene3D Aldolase class I 107 413 IPR013785 -
Ahy4g1973 413 SMART DHDPS_2 113 389 IPR002220 GO:0016829
Ahy4g1973 413 SUPERFAMILY Aldolase 116 387 - -
Ahy4g1973 413 ProSitePatterns Dihydrodipicolinate synthase signature 1. 149 166 IPR020624 GO:0016829
Ahy4g1973 413 PANTHER DIHYDRODIPICOLINATE SYNTHASE 70 412 IPR002220 GO:0016829
Ahy4g1973 413 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE, CHLOROPLASTIC 70 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1973 Ahy-Chr4 112098967 112101941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1973 K01714 - gmx:100788930 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2250 14 123464291 123467355 Ahy4g1973 4 112098967 112101941 hybridization
Ahy4g1973 4 112098967 112101941 Ahy12g2395 12 112159810 112163023 PCT
Ahy4g1973 4 112098967 112101941 Ahy2g2075 2 96066588 96069770 PCT
Ahy12g2395 12 112159810 112163023 Ahy4g1973 4 112098967 112101941 PCT
Ahy2g2075 2 96066588 96069770 Ahy4g1973 4 112098967 112101941 PCT