Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2250 ATGGGTTCGGTTTGGATGACTGCGTCTGAGAACTCTCTAACTTTATTAAACAAACACGGAAAGTGGAAAGCAGGAAATTGTCTTTGCAACTACTGCCATTTCTTCCACTTTCATCAACATTTATTTCACTCACACGCTTCAAACGACGTCGTTTTGCTTAACATTCTCATGGCCCTCTTGAAGACCTCCACCACTCTCTCCTTCAGAGCAACCGCTTTTCCGCTTTTACCATCCGATGTCACCCATGGCCATACCACCAACACCAGGAAGTTGCATTGGAAGCCTACTCAAGCTGCTTTGACATCCAGTTTCCACCTTCCAATGCGTAGCTTTGAGGCTAAGAACAGGACTTCCACAGATGACGTAAAGCGTCTGAGATTGATAACTGCCATTAAGACACCATACCTACCCGATGGTCGCTTTGATCTTGAAGCATATGATACCTTAGTAAATTTGCAGATTGAAAATGGAGTTGAAGGTGTTATTGTTGGTGGCACAACTGGAGAAGGCCAATTAATGAGCTGGGACGAACACATAATGCTTATTGGGCACACAGTCAACTGTTTCGGAGTGAAAATCAAGGTTATAGGAAACACCGGAAGCAACTCCACAAGGGAAGCAATCCATGCCACAGAGCAGGGTTTTGCTGTTGGGATGCACGCTGCCCTTCACATAAACCCTTACTACGGCAAAACCTCCTTGAATGGTTTGATTTCTCACTTCAATACCGTGCTTCCCATGGGGCCTACCATCATATACAATGTGCCTTCAAGGACCAGTCAAGACATTCCTCCACAGGTGATTCAAACCTTAGCACAGAGTGCGAGTTTAGCCGGTGTCAAGGAATGTATGGGAAATGACAGGATCAAACAATATACAGATAATGGTATTGTTGTGTGGAGCGGGAATGATGACCAATGCCATGATGCTAGATGGGGTTACGGGGCGACAGGAGTGATATCTGTCGCAAGCAACCTGGTTCCCGGTTTAATGCGAGAACTCATAATTGGTGGTGAGAATCCGGCGCTGAATTCTAAGCTCATGCCTCTTGTTGAATGGCTTTTTTGCGAGCCAAACCCCATCGGTTTGAACACAGCTCTTGCTCAACTCGGAGTTGCTCGGCCGGTTTTCAGGCTACCATATGTACCTCTCCCTTTGAAGAAGCGGATGGAATTTGTCAATTTGGTGAAGGGAATCGGTCGAGAGCACTTTATTGGAGACAAAGATGTTCAGGTTCTTGATGATAATGACTTTATCTTAATTGGTCGTCATTAA 1275 0.4541 MGSVWMTASENSLTLLNKHGKWKAGNCLCNYCHFFHFHQHLFHSHASNDVVLLNILMALLKTSTTLSFRATAFPLLPSDVTHGHTTNTRKLHWKPTQAALTSSFHLPMRSFEAKNRTSTDDVKRLRLITAIKTPYLPDGRFDLEAYDTLVNLQIENGVEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGVKIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLNGLISHFNTVLPMGPTIIYNVPSRTSQDIPPQVIQTLAQSASLAGVKECMGNDRIKQYTDNGIVVWSGNDDQCHDARWGYGATGVISVASNLVPGLMRELIIGGENPALNSKLMPLVEWLFCEPNPIGLNTALAQLGVARPVFRLPYVPLPLKKRMEFVNLVKGIGREHFIGDKDVQVLDDNDFILIGRH* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2250 424 CDD DHDPS 126 396 IPR005263 GO:0008840|GO:0009089
Ahy14g2250 424 Pfam Dihydrodipicolinate synthetase family 126 397 IPR002220 GO:0016829
Ahy14g2250 424 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE, CHLOROPLASTIC 86 423 - -
Ahy14g2250 424 PANTHER DIHYDRODIPICOLINATE SYNTHASE 86 423 IPR002220 GO:0016829
Ahy14g2250 424 ProSitePatterns Dihydrodipicolinate synthase signature 2. 253 283 IPR020625 GO:0016829
Ahy14g2250 424 PRINTS Dihydrodipicolinate synthase signature 225 241 IPR002220 GO:0016829
Ahy14g2250 424 PRINTS Dihydrodipicolinate synthase signature 157 178 IPR002220 GO:0016829
Ahy14g2250 424 PRINTS Dihydrodipicolinate synthase signature 248 265 IPR002220 GO:0016829
Ahy14g2250 424 PRINTS Dihydrodipicolinate synthase signature 193 211 IPR002220 GO:0016829
Ahy14g2250 424 SUPERFAMILY Aldolase 127 398 - -
Ahy14g2250 424 Gene3D Aldolase class I 118 424 IPR013785 -
Ahy14g2250 424 SMART DHDPS_2 124 400 IPR002220 GO:0016829
Ahy14g2250 424 ProSitePatterns Dihydrodipicolinate synthase signature 1. 160 177 IPR020624 GO:0016829
Ahy14g2250 424 TIGRFAM dapA: 4-hydroxy-tetrahydrodipicolinate synthase 127 391 IPR005263 GO:0008840|GO:0009089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2250 Ahy-Chr14 123464291 123467355 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2250 K01714 - gmx:100788930 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2250 14 123464291 123467355 Ahy14g2250 14 123464291 123467355 ECH
Ahy14g2250 14 123464291 123467355 Ahy4g1973 4 112098967 112101941 hybridization
Ahy14g2250 14 123464291 123467355 Ahy12g2395 12 112159810 112163023 PCT
Ahy14g2250 14 123464291 123467355 Ahy2g2075 2 96066588 96069770 PCT
Ahy12g2395 12 112159810 112163023 Ahy14g2250 14 123464291 123467355 PCT
Ahy2g2075 2 96066588 96069770 Ahy14g2250 14 123464291 123467355 PCT