Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1903 ATGGAGTCTAATACACTAGACAAGAATGAGAGAAACTGGGCTGACGAAGGAATACCGCCTGTCCGATTGGGTCTGCGGGAGAAGAAATTTGTTCTGCAGAACTTGGTGGTATTTCCTCTCAAACTTCAGAATTTGTGGCTTTTGAACAATTATATGGGGAACTGTTTGGATAAGGATGAATCTACGGATACACATTCTGATCAACACGTGGAGTTAGCTTCTGGAAATGTGAAACTTATTAGCAGCTCCGAAGCTTGGGAGCAAAAGTTGGAAGAAGCAACAAGAGATGGCAAAACTGTGATCCTGAATTTCAGTGCTACTTGGTGTGGTCCTTGTAAAATGATTGCGCCGTATTACTGCGAGTTATCTGAGAAATTCACATCGATAGTGTTCTTAATAGTCGATGTGGATGAACTAAGCGACTTCGCCGCTACATGGGACATCAAAGCCACGCCAACTTTCTTCTTTTTTCAAAACGGACAACAAGTTGACAAACTTGTAGGAGCAAACAAGCCAGAGCTGCAGAAGAAGATTGCTGCCATTACCGACTCGGTTCCAAAGTGGCAGTAA 570 0.4316 MESNTLDKNERNWADEGIPPVRLGLREKKFVLQNLVVFPLKLQNLWLLNNYMGNCLDKDESTDTHSDQHVELASGNVKLISSSEAWEQKLEEATRDGKTVILNFSATWCGPCKMIAPYYCELSEKFTSIVFLIVDVDELSDFAATWDIKATPTFFFFQNGQQVDKLVGANKPELQKKIAAITDSVPKWQ* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1903 189 PANTHER THIOREDOXIN 52 187 - -
Ahy4g1903 189 PANTHER THIOREDOXIN H9 52 187 - -
Ahy4g1903 189 Pfam Thioredoxin 82 179 IPR013766 -
Ahy4g1903 189 ProSiteProfiles Thioredoxin domain profile. 59 183 IPR013766 -
Ahy4g1903 189 ProSitePatterns Thioredoxin family active site. 101 119 IPR017937 -
Ahy4g1903 189 PRINTS Thioredoxin family signature 147 158 - -
Ahy4g1903 189 PRINTS Thioredoxin family signature 100 108 - -
Ahy4g1903 189 PRINTS Thioredoxin family signature 108 117 - -
Ahy4g1903 189 SUPERFAMILY Thioredoxin-like 69 182 IPR036249 -
Ahy4g1903 189 Gene3D Glutaredoxin 52 187 - -
Ahy4g1903 189 CDD TRX_family 90 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1903 Ahy-Chr4 110266201 110271209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1903 K03671 - gmx:100813401 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2161 14 120284189 120289208 Ahy4g1903 4 110266201 110271209 hybridization
Ahy4g1903 4 110266201 110271209 Ahy12g0617 12 9895575 9899468 PCT
Ahy4g1903 4 110266201 110271209 Ahy2g0518 2 7379844 7384020 PCT
Ahy12g0617 12 9895575 9899468 Ahy4g1903 4 110266201 110271209 PCT
Ahy2g0518 2 7379844 7384020 Ahy4g1903 4 110266201 110271209 PCT