Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy14g2161 | ATGGGGAACTGTTTGGATAAGGATGAATCTACGGATACACATTCTGATCAACATGTGGAGTTAGCTTCTGGAAATGTGAAACTTATTAGCAGCACCGAAGCTTGGGAGCAAAAGTTGGAAGAAGCAACGAGAGATGGCAAAACTGTGATCCTGAATTTCAGTGCTACTTGGTGTGGTCCTTGTAAAATGATTGCGCCGTATTACTGCGAGTTATCTGAGAAATTCACATCGATAGTGTTCTTAATAGTCGATGTGGATGAACTAAGCGACTTCGCCGCTACATGGGACATCAAAGCCACGCCAACTTTCTTCTTTTTTCAAAATGGACAACAAGTTGACAAACTTGTAGGAGCAAACAAGCCAGAGCTGCAGAAGAAGATTGCTGCCATTACCGATTCGGTTCCAAAGTGGCAGTAA | 417 | 0.4293 | MGNCLDKDESTDTHSDQHVELASGNVKLISSTEAWEQKLEEATRDGKTVILNFSATWCGPCKMIAPYYCELSEKFTSIVFLIVDVDELSDFAATWDIKATPTFFFFQNGQQVDKLVGANKPELQKKIAAITDSVPKWQ* | 139 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy14g2161 | 138 | ProSiteProfiles | Thioredoxin domain profile. | 8 | 132 | IPR013766 | - | |
| Ahy14g2161 | 138 | PANTHER | THIOREDOXIN | 1 | 136 | - | - | |
| Ahy14g2161 | 138 | Pfam | Thioredoxin | 31 | 128 | IPR013766 | - | |
| Ahy14g2161 | 138 | SUPERFAMILY | Thioredoxin-like | 20 | 131 | IPR036249 | - | |
| Ahy14g2161 | 138 | CDD | TRX_family | 39 | 128 | - | - | |
| Ahy14g2161 | 138 | ProSitePatterns | Thioredoxin family active site. | 50 | 68 | IPR017937 | - | |
| Ahy14g2161 | 138 | PANTHER | THIOREDOXIN H9 | 1 | 136 | - | - | |
| Ahy14g2161 | 138 | Gene3D | Glutaredoxin | 1 | 136 | - | - | |
| Ahy14g2161 | 138 | PRINTS | Thioredoxin family signature | 49 | 57 | - | - | |
| Ahy14g2161 | 138 | PRINTS | Thioredoxin family signature | 57 | 66 | - | - | |
| Ahy14g2161 | 138 | PRINTS | Thioredoxin family signature | 96 | 107 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy14g2161 | Ahy-Chr14 | 120284189 | 120289208 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy14g2161 | K03671 | - | gmx:100813401 | 216.083 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy14g2161 | 14 | 120284189 | 120289208 | Ahy14g2161 | 14 | 120284189 | 120289208 | ECH | |
| Ahy14g2161 | 14 | 120284189 | 120289208 | Ahy4g1903 | 4 | 110266201 | 110271209 | hybridization | |
| Ahy14g2161 | 14 | 120284189 | 120289208 | Ahy12g0617 | 12 | 9895575 | 9899468 | PCT | |
| Ahy14g2161 | 14 | 120284189 | 120289208 | Ahy2g0518 | 2 | 7379844 | 7384020 | PCT | |
| Ahy12g0617 | 12 | 9895575 | 9899468 | Ahy14g2161 | 14 | 120284189 | 120289208 | PCT | |
| Ahy2g0518 | 2 | 7379844 | 7384020 | Ahy14g2161 | 14 | 120284189 | 120289208 | PCT |