Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0617 ATGGGACTTTGTTTAGCTAAGGATCAAGATAAAGATGATGATTCTGACCATCATGTGGACATGGTTTCTGGGAATGTGCAACTTATTACCACAAAAGAATCTTGGGACCAAAAGTTGCAAGAATCATCGAAGGATCACAAAATTCTGATTGCAAATTTCAGTGCTGCATGGTGTGGTCCTTGTAAGCTTATTGCACCATATTACTGTGAGTTGTCAGAGAAATACTCATCAATGATCTTCTTACTAGTTGATGTGGATGAACTAACTGATTTTAGTACTTCCTTGGACATCAGAGCCACACCAACTTTCTTCTTTTTTAGAGATGGACAACAAATTGATAAACTCATAGGAGCCAACAAGCCAGAGTTGGCAAAGAAGATTGCTTTGTTTTCTACTTCATTTGGTTCCTCAATACCAAATTACCAATAG 429 0.3753 MGLCLAKDQDKDDDSDHHVDMVSGNVQLITTKESWDQKLQESSKDHKILIANFSAAWCGPCKLIAPYYCELSEKYSSMIFLLVDVDELTDFSTSLDIRATPTFFFFRDGQQIDKLIGANKPELAKKIALFSTSFGSSIPNYQ* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0617 142 Pfam Thioredoxin 29 127 IPR013766 -
Ahy12g0617 142 PANTHER THIOREDOXIN H9 1 132 - -
Ahy12g0617 142 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Ahy12g0617 142 PRINTS Thioredoxin family signature 57 66 - -
Ahy12g0617 142 PRINTS Thioredoxin family signature 49 57 - -
Ahy12g0617 142 PRINTS Thioredoxin family signature 96 107 - -
Ahy12g0617 142 SUPERFAMILY Thioredoxin-like 19 128 IPR036249 -
Ahy12g0617 142 CDD TRX_family 33 128 - -
Ahy12g0617 142 PANTHER THIOREDOXIN 1 132 - -
Ahy12g0617 142 ProSiteProfiles Thioredoxin domain profile. 6 132 IPR013766 -
Ahy12g0617 142 Gene3D Glutaredoxin 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0617 Ahy-Chr12 9895575 9899468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0617 K03671 - gmx:100813401 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0617 12 9895575 9899468 Ahy2g0518 2 7379844 7384020 hybridization
Ahy14g2161 14 120284189 120289208 Ahy12g0617 12 9895575 9899468 PCT
Ahy4g1903 4 110266201 110271209 Ahy12g0617 12 9895575 9899468 PCT
Ahy12g0617 12 9895575 9899468 Ahy14g2161 14 120284189 120289208 PCT
Ahy12g0617 12 9895575 9899468 Ahy4g1903 4 110266201 110271209 PCT