Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1898 ATGAAGAGATTGCAACTAGGCACAATTTCTTTGGTCCTTCTTCTGATTATTCTTACAAAATCTTCAACTACCAATGCAGTAGAAGATGACAGTGTTAAGAATGAAGAATCTGACAAGGAAGAGCAAAATCATGTTCCAAATTCTACCTCAAGTTATGGGATTGAAATAGTGGGGGAGATGGAAGAAGATGAATGGGAAATGGTGCAAAAGAGAGGGAACCAATTTGTGCTGAATGAGAAACCATTTTACATAAATGGATTCAACACATACTGGCTGATGGTGTTTGCTGTGGATGAGTCAACTAGAGGGAAGGTCACTGAGGTGTTCCAACAAGCTTCCTCAGTTGGCATGACCGTTTGTAGGACTTGGGCCTTCAATGATGCCCAATGGAGGGCCCTACAAAAATCTCCATCCGTTTATGATGAAGATGTCTTCAAGGCACTGGATTTTGTGGTAAGTGAAGCAAAGAAATCCAAGATCAGGTTGATATTATCACTGGCAAACAATTGGGAAGCATATGGTGGAAAAGCACAGTATGTGAAATGGGGAAAAGATGCTGGCCTCAATGTCTCTTCTGATGACGACTTCTTCTCACATCCAACTCTTAGAACCTACTACAAGAACCATGTTAAGACGGTGTTGAATAGAGTGAACACATTGACAAATATAACATACAAGGAAGATCCAACCATATTTGCATGGGAATTGATGAATGAACCTCGATGCACCTCAGATCCCACTGGTGATAAGCTTCAGGATTGGATACAAGAAATGGCATTCCATGTGAAGAAGATTGATGCAAAGCACCTAGTAGAAATTGGAGTTGAAGGATTTTATGGGCCCTCAACCCCTCACAGAACTCAGTTCAATCCAAATTCATATGCAACACAAGTTGGAACTGATTTCATTAGGAACCACCAGGTTCTTGGTGTTGACTTTGCTTCTGCTCACATATATGCTGACTCTTGGATCTCACAGCAAATTTCCGAAAGCCATCTGGAATTCATAACATCATGGATGAAATCCCACATAGAAGACGCAGAAAAGCATCTGGGAATGCCAATAATCTTTGCAGAATTCGGTGTATCATCAAAGGACCCTGGCTACAATGCAACATACAGAGACAACCTTATAACAAGTGTGTACAAAACAATCTTAAACTCCACAAAGAAAGGAGGAAGTGGCGGCGGAACACTCTTGTGGCAGGTGTTTCCTGAAGGAACTGATAACATGGATGATGGTTATGCTATTGTGCTCTCTAAGTCTCCTTCTACTTCTGCTGTTGTGTCACTTCAGTCCTCAAGGCTTGCTTTGTTCAATTCAATGTGTTCTTCTAAATTCCAGTGGAGTTGTAAGAAGAAGAAAGTCATCTATGATCCTCATGATGAATTCTAG 1395 0.41 MKRLQLGTISLVLLLIILTKSSTTNAVEDDSVKNEESDKEEQNHVPNSTSSYGIEIVGEMEEDEWEMVQKRGNQFVLNEKPFYINGFNTYWLMVFAVDESTRGKVTEVFQQASSVGMTVCRTWAFNDAQWRALQKSPSVYDEDVFKALDFVVSEAKKSKIRLILSLANNWEAYGGKAQYVKWGKDAGLNVSSDDDFFSHPTLRTYYKNHVKTVLNRVNTLTNITYKEDPTIFAWELMNEPRCTSDPTGDKLQDWIQEMAFHVKKIDAKHLVEIGVEGFYGPSTPHRTQFNPNSYATQVGTDFIRNHQVLGVDFASAHIYADSWISQQISESHLEFITSWMKSHIEDAEKHLGMPIIFAEFGVSSKDPGYNATYRDNLITSVYKTILNSTKKGGSGGGTLLWQVFPEGTDNMDDGYAIVLSKSPSTSAVVSLQSSRLALFNSMCSSKFQWSCKKKKVIYDPHDEF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1898 464 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 9 457 - -
Ahy4g1898 464 MobiDBLite consensus disorder prediction 29 43 - -
Ahy4g1898 464 SUPERFAMILY (Trans)glycosidases 67 431 IPR017853 -
Ahy4g1898 464 Gene3D Glycosidases 65 439 - -
Ahy4g1898 464 PANTHER - 9 457 IPR045053 GO:0004553
Ahy4g1898 464 MobiDBLite consensus disorder prediction 27 49 - -
Ahy4g1898 464 Pfam Cellulase (glycosyl hydrolase family 5) 78 376 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1898 Ahy-Chr4 110218968 110223709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1898 37 454 Glycoside Hydrolase AT5G01930 69.139 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1898 K19355 - gmx:100811794 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2154 14 120164276 120169810 Ahy4g1898 4 110218968 110223709 hybridization
Ahy4g1898 4 110218968 110223709 Ahy12g0616 12 9891422 9894427 PCT
Ahy4g1898 4 110218968 110223709 Ahy2g0517 2 7370220 7373065 PCT
Ahy12g0616 12 9891422 9894427 Ahy4g1898 4 110218968 110223709 PCT
Ahy2g0517 2 7370220 7373065 Ahy4g1898 4 110218968 110223709 PCT