Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2154 ATGAAGAGATTGCAACTAGGCACAATTTCTTTGGCCCTTCTGATTATTCTTACAAAATCTTCAATTGCCAATGCATTAGAAGATGGCAGTATTAAGAATGAAGAATCTGACAAGGAAGAGCAAAATCATGTTCCAAATTCTATCTCAAGTTATGGGATTGAAACGGTGGGGGAGATGGAAGAAGATGAATGGGAAATGGTGCAAAAGAGAGGGAACCAATTTGTGGTGAATGAGAAACCATTTTACATAAATGGATTCAACACATACTGGCTGATGGTGTTTGCTGTGGATGAGTCAACAAGAGGGAAGGTCACTGAGGTGTTCCAACAAGCTTCCTCAGTTGGCATGACCGTTTGTAGGACTTGGGCCTTCAATGATGCCCAATGGAGGGCCCTACAAAAATCTCCATCCGTTTATGATGAAGATGTCTTCAAGGCATTGGATTTTGTGGTAAGTGAAGCAAAGAAATACAAGATCAGGTTGATATTATCACTGGCAAACAATTGGGAAGCATATGGTGGAAAAGCACAGTATGTGAAATGGGGAAAAGATGCTGGCCTCAATGTCTCTTCTGATGACGACTTCTTCTCACATCCAACTCTTAGAACCTACTACAAGAACCATGTTAAGACGGTGTTGAATAGAGTGAACACATTGACAAATATGACATACAAGGAAGATCCAACCATATTTGCATGGGAATTGATGAATGAACCTCGATGCACCTCAGATCCCGCTGGTGATAAGCTTCAGGATTGGATACAAGAAATGGCATTCCATGTGAAGAAGATTGATCCAAAGCACCTAGTAGAAATTGGAGTTGAAGGATTTTATGGGCCCTCAACCCCTCACAGAACTCAGTTCAATCCAAATTCATATGCAACACAAGTTGGAACTGATTTCATTAGGAACCACCAGGTTCTTGGTGTTGACTTTGCTTCTGCTCACATATATGCTGACTCTTGGATCTCACAGCAAATTTCCGAAAGCCATCTAGAATTCATAACATCATGGATGCAATCCCACATAGAAGACGCGGAAAAGCATCTGGGAATGCCAATAATCTTTGCAGAATTCGGTGTATCATCAAAGGACCCTGGCTACAATGCAACATACAGAGACAACCTTATAACAAGTGTGTACAAAACAATCTTAAACTCCACAAAGAAAGGAGGAAGTGGCGGCGGAACACTCTTGTGGCAGGTGTTTCCTGAAGGAACTGATAACATGGATGATGGTTATGCTATTGTGCTCTCTAAGTCTCCTTCTACTTCTGCTGTTGTGTCACTTCAGTCCTCAAGGCTTGCTTTGTTCAATTCAATGTGTTCTTCTAAATTCCAGTGGAGTTGTAAGAAGAAGAAAGTCATCTATGATCCTCATGATGAATTCTAG 1392 0.4116 MKRLQLGTISLALLIILTKSSIANALEDGSIKNEESDKEEQNHVPNSISSYGIETVGEMEEDEWEMVQKRGNQFVVNEKPFYINGFNTYWLMVFAVDESTRGKVTEVFQQASSVGMTVCRTWAFNDAQWRALQKSPSVYDEDVFKALDFVVSEAKKYKIRLILSLANNWEAYGGKAQYVKWGKDAGLNVSSDDDFFSHPTLRTYYKNHVKTVLNRVNTLTNMTYKEDPTIFAWELMNEPRCTSDPAGDKLQDWIQEMAFHVKKIDPKHLVEIGVEGFYGPSTPHRTQFNPNSYATQVGTDFIRNHQVLGVDFASAHIYADSWISQQISESHLEFITSWMQSHIEDAEKHLGMPIIFAEFGVSSKDPGYNATYRDNLITSVYKTILNSTKKGGSGGGTLLWQVFPEGTDNMDDGYAIVLSKSPSTSAVVSLQSSRLALFNSMCSSKFQWSCKKKKVIYDPHDEF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2154 463 Pfam Cellulase (glycosyl hydrolase family 5) 77 375 IPR001547 GO:0004553|GO:0071704
Ahy14g2154 463 Gene3D Glycosidases 64 438 - -
Ahy14g2154 463 SUPERFAMILY (Trans)glycosidases 66 430 IPR017853 -
Ahy14g2154 463 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 9 456 - -
Ahy14g2154 463 PANTHER - 9 456 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2154 Ahy-Chr14 120164276 120169810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2154 5 453 Glycoside Hydrolase AT5G01930 65.929 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2154 K19355 - gmx:100811794 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2154 14 120164276 120169810 Ahy14g2154 14 120164276 120169810 ECH
Ahy14g2154 14 120164276 120169810 Ahy4g1898 4 110218968 110223709 hybridization
Ahy14g2154 14 120164276 120169810 Ahy12g0616 12 9891422 9894427 PCT
Ahy14g2154 14 120164276 120169810 Ahy2g0517 2 7370220 7373065 PCT
Ahy12g0616 12 9891422 9894427 Ahy14g2154 14 120164276 120169810 PCT
Ahy2g0517 2 7370220 7373065 Ahy14g2154 14 120164276 120169810 PCT