Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1473 ATGAAGCTTTTGGTGTTTCCAGTATTAGCATGGAGTTTCGCTCTTCTAGCTTCTTCCTTGGCTTCAGCTGCCATTGTAGAACACACCTTCAATATTGAAAACAAGATTGTAAAACGGATGTGCCATGAACAAGTGATAGTGGCAGCCAATGGACTCTATCCTGGACCCACAATACACGTCACTGAAGGTGACACTGTCATCATCCATGTTCTCAATAACTCACCCTACAATATTACTCTCCATTGGCATGGAATATATCAGCTCTTTACTTCTTGGGCAGACGGTGTTGAATATGTAACTCAATGTGGAATTCATCCTGGACATAAATTCACTTATAAATATAAAGTCATAGGACAAGAAGGAACTTTATTTTGGCATGCTCACTCATTTGCCTTACGTGCTACCCTTCATGGTGCTTTCATCATTCACCCTCGCAATGGTCGATACCCATTTCCAAAACCCTACCACCAGGTTCCAATAATACTAGGTGACTGGTATGACACTAATTTTTTGGATGCTTTGGAAGGTGCACTCGTAAGTGGAGGTGTTGCGGTATCTAATGCCTACACCATAAATGGCTTCCCTGGCGATCTCTTTAATTGTTCTCAAAATGAGACGTTCAAGATGAAGGTGAAGCATGGAAAGACCTACCTCTTAAGAATTATCAACGCTGCACTGAATAACAATCTGTTCTTCAAGATAGCCGATCACAAACTCACCGTGGTTGCCGCCGATGCTTCATACACCAAACCATACGTTACAGACATAATTATCCTTGCAGCTGGTCAAACCCTTGACGTTCTATTCAAAGCAGACCAACCAACAGGATCATACTACATGGTAGCATCTCCGTATGGCGTTGGCATGCCACCTCCACTCTTTGATAGAACGATGACCCGTGGCATCGTCGTCTATGACGGACACAATACTCGAGCGTCACCACCGGTCATGCCATTACTGCCTCCATTCTTTGACACGCCAACAAGTTTCAAATTGTTTAGTAACTTATCGAGTCTCGTTGGGGGCCCACATTGGGTCCCTGTCCCACTCAACGTTGATGAACAAATGTTCATCACCGTTGGGATTGGACTTGAGAAGTGCCCTGTGAATGCCAAGTGTGTTGGCCCACTCAACCAAAAATTCTCAGCAAACATGAACAATGAGTCTTTTATGCTCCCTAAAGGGAAAGGTAATTCTATGTTGGAAGCTTCCTATTACAATGTAAGTGGTGTGTACACTACTGATTTCCCTGATAATCCTCCTATGGTGTTTGACTACACAAACACTAACCTCACTTTCAACATGAGCCTGGTATATTCGCCAAAATCAACCAAGGTGAAGAAGTTCAAGTTCAATTCCACGGTGGAGATTGTGTTTCAAAACACAGGGGTTTTGAAAGCGCAAAGCCATCCGATCCATGTCCATGGTCATAGTTTCCATGTTTTGGCTCAAGGGTTTGGGAACTACGATGCCGATAGAGATAAGGCAAAGTTTAATTTGGTGAATCCTCAGTTCCGGAATACAGTTGCAGTGCCTGCAGGAGGATGGGCTGTTATAAGATTCCAAGCAAGCAATCCAGGGGTATGGTTTGTGCACTGCCATGTGGATGATCATCAAGTATGGGGACTAGGCACTGCTTTTGTGGTTGAGAATGGACCAACTCCTGAAACTTCACTTCCTCCTCCACCGGCAGATTTGCCTAAATGTTAG 1710 0.4398 MKLLVFPVLAWSFALLASSLASAAIVEHTFNIENKIVKRMCHEQVIVAANGLYPGPTIHVTEGDTVIIHVLNNSPYNITLHWHGIYQLFTSWADGVEYVTQCGIHPGHKFTYKYKVIGQEGTLFWHAHSFALRATLHGAFIIHPRNGRYPFPKPYHQVPIILGDWYDTNFLDALEGALVSGGVAVSNAYTINGFPGDLFNCSQNETFKMKVKHGKTYLLRIINAALNNNLFFKIADHKLTVVAADASYTKPYVTDIIILAAGQTLDVLFKADQPTGSYYMVASPYGVGMPPPLFDRTMTRGIVVYDGHNTRASPPVMPLLPPFFDTPTSFKLFSNLSSLVGGPHWVPVPLNVDEQMFITVGIGLEKCPVNAKCVGPLNQKFSANMNNESFMLPKGKGNSMLEASYYNVSGVYTTDFPDNPPMVFDYTNTNLTFNMSLVYSPKSTKVKKFKFNSTVEIVFQNTGVLKAQSHPIHVHGHSFHVLAQGFGNYDADRDKAKFNLVNPQFRNTVAVPAGGWAVIRFQASNPGVWFVHCHVDDHQVWGLGTAFVVENGPTPETSLPPPPADLPKC* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1473 569 PANTHER MULTI-COPPER OXIDASE 1 569 IPR045087 -
Ahy4g1473 569 CDD CuRO_1_LCC_plant 28 144 IPR034288 GO:0005507
Ahy4g1473 569 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Ahy4g1473 569 ProSitePatterns Multicopper oxidases signature 2. 532 543 IPR002355 GO:0005507
Ahy4g1473 569 CDD CuRO_2_LCC_plant 158 305 IPR034285 -
Ahy4g1473 569 PANTHER LACCASE 1 569 - -
Ahy4g1473 569 Gene3D - 370 569 IPR008972 -
Ahy4g1473 569 Pfam Multicopper oxidase 416 551 IPR011706 GO:0005507|GO:0016491
Ahy4g1473 569 SUPERFAMILY Cupredoxins 151 329 IPR008972 -
Ahy4g1473 569 ProSitePatterns Multicopper oxidases signature 1. 527 547 IPR033138 -
Ahy4g1473 569 TIGRFAM laccase: laccase 24 569 IPR017761 GO:0046274|GO:0048046|GO:0052716
Ahy4g1473 569 Gene3D - 15 144 IPR008972 -
Ahy4g1473 569 Gene3D - 155 321 IPR008972 -
Ahy4g1473 569 SUPERFAMILY Cupredoxins 22 169 IPR008972 -
Ahy4g1473 569 CDD CuRO_3_LCC_plant 411 552 IPR034289 GO:0005507
Ahy4g1473 569 SUPERFAMILY Cupredoxins 349 569 IPR008972 -
Ahy4g1473 569 Pfam Multicopper oxidase 158 307 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1473 Ahy-Chr4 79839763 79848164 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1473 K05909 - gmx:100815453 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1650 14 90194780 90206353 Ahy4g1473 4 79839763 79848164 hybridization
Ahy4g1473 4 79839763 79848164 Ahy12g1891 12 100139644 100144455 PCT
Ahy4g1473 4 79839763 79848164 Ahy2g1671 2 87315720 87323194 PCT