Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1650 ATGAATCTCCTCATTTTTCCACTACAATGGGGCTTTCTTCTTTTAACTTCTTCCTTATTATTGGCTTTATCCTCAACGGTGGAATACACTTTTAACATTGAAAATACAAGCATGCAACGGTTGTGCCATGAGGAATCCATAGTTGTAGTTAATGGAAGTCTCCCTGGACCAACCATTGATGTAAGAGAAGGTGACACTGTCATAGTTCATGTACTCAACCATTCGCCCTATAATATCACTATTCATTGGCATGGAGTTTATCAGCTTTTTAATGGTTGGGCAGATGGCACTGAATATGTAACTCAGTGTGGAATTGTCCCAAGAAACAGTTATACCTATACGTTCAATGTAACCGGGCAAGAGGGAACTCTCTGGTGGCATGCTCATTCATTTGATCTACGTGGCACTGTTTATGGTGCTTTCATAATTCGTCCTCCACTGGGTTCATCATATCCATTTCCTCAACCATATCAAGAACTTCCAATATTATTAGGTGATTGGTATAATGGTAATATCGTAGACATCGAGATAGAAGCACTCGCTGAGGGTCATGGTTCTAATTATTCAAATGCTTACACCATAAATGGCTTTCCGGGTGATCTCTACAATTGTTCACAAAATCAGACATACAAGATCAACGTGACTCAAGGAAAGACTTACTTGCTCCGAATGATGAATGCTGCACTCGATAGCCATTTTTTCTTCAAATTAGCAAATCACAGCTTCACAGTGGTTGCCGTTGATGCTTCATACACAGTACCATATCACACGGATATCGTTGTCATTGCCCCTGGACAAACCGTTGATGCTCTTTTCACAGCAAACCAATCCAACGGTTCATACTACATGGCTGCCTCTCCTTACAATGTCGGTGTGCCAGCGTTTGACAAAACGACAACACGTGGCATTGTCGTTTACGGCAATGATGAAAATGAAACCACCACACCACCCGTGATGCCAGTTTTACCAGTCGTCAACGACACAGCAACGGCTTTTACGTTTTATAGTAACCTCACAAGCCTAGTGGGGGCCCCACATTGGGTCCCTGTGCCACTTAACGTGGATGAGCGAATGTTCATCACTGTTGGATTAGGCTTAGAACATTGCCCCGAGGGTGCATCGTGTTCAGGTCCCAATGGAGAAAAATATTCTGCAAGCATGAACAACGAGTCTTTTGTGCTTCCTAAAGGAAGAAGGTTCTCGATGTTAGAAGCTTTCTATTACAATATGAGTGGCGTGTTCACTACTGATTTTCCTGACCATCCAGTATGGTTTGACTTCACAAACGAAAGTCTAAGTGATGACGCGGCAATCATGTATGCTCCCAAATCAACCAAGTCGAAGAGACTTAAGTTCAATTCAACGGTGGAGATTGTATATCAAAATACAGCACTTCTTTATGAGATAAATCATCCCATGCACATTCATGGTTATAGTTTCTATGTTTTGGCCCAAGGCTTTGGAGATTTCAATCCTAGGCTTGATCAAGCAAAGTATAATTTGATTAATCCTCAAATACGCAACACAATTGCTGTGTCTGCTGGAGGATGGGCTGTCATCAGATTTCAAGCAAATAATCCAGGGGTATGGTTTGTACATTGCCATGTGGATGATCACTTGGAATGGGGACTAGACATGACTTTTGAGGTTGAAAATGGACCAACTCCTTCAACTTCACTCCCTCCACCACCCATTGATATGCCTGAATGCGATATCAGTGCCAACATGTACAAGTGCATTCTTGAAACCAACAACACGTCATGTTTTCTCTAA 1773 0.4202 MNLLIFPLQWGFLLLTSSLLLALSSTVEYTFNIENTSMQRLCHEESIVVVNGSLPGPTIDVREGDTVIVHVLNHSPYNITIHWHGVYQLFNGWADGTEYVTQCGIVPRNSYTYTFNVTGQEGTLWWHAHSFDLRGTVYGAFIIRPPLGSSYPFPQPYQELPILLGDWYNGNIVDIEIEALAEGHGSNYSNAYTINGFPGDLYNCSQNQTYKINVTQGKTYLLRMMNAALDSHFFFKLANHSFTVVAVDASYTVPYHTDIVVIAPGQTVDALFTANQSNGSYYMAASPYNVGVPAFDKTTTRGIVVYGNDENETTTPPVMPVLPVVNDTATAFTFYSNLTSLVGAPHWVPVPLNVDERMFITVGLGLEHCPEGASCSGPNGEKYSASMNNESFVLPKGRRFSMLEAFYYNMSGVFTTDFPDHPVWFDFTNESLSDDAAIMYAPKSTKSKRLKFNSTVEIVYQNTALLYEINHPMHIHGYSFYVLAQGFGDFNPRLDQAKYNLINPQIRNTIAVSAGGWAVIRFQANNPGVWFVHCHVDDHLEWGLDMTFEVENGPTPSTSLPPPPIDMPECDISANMYKCILETNNTSCFL* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1650 590 PANTHER LACCASE 1 570 - -
Ahy14g1650 590 PANTHER MULTI-COPPER OXIDASE 1 570 IPR045087 -
Ahy14g1650 590 SUPERFAMILY Cupredoxins 351 564 IPR008972 -
Ahy14g1650 590 Gene3D - 374 579 IPR008972 -
Ahy14g1650 590 SUPERFAMILY Cupredoxins 153 345 IPR008972 -
Ahy14g1650 590 TIGRFAM laccase: laccase 26 570 IPR017761 GO:0046274|GO:0048046|GO:0052716
Ahy14g1650 590 Pfam Multicopper oxidase 421 552 IPR011706 GO:0005507|GO:0016491
Ahy14g1650 590 Gene3D - 20 146 IPR008972 -
Ahy14g1650 590 ProSitePatterns Multicopper oxidases signature 2. 533 544 IPR002355 GO:0005507
Ahy14g1650 590 Gene3D - 157 344 IPR008972 -
Ahy14g1650 590 SUPERFAMILY Cupredoxins 25 169 IPR008972 -
Ahy14g1650 590 CDD CuRO_2_LCC_plant 161 306 IPR034285 -
Ahy14g1650 590 CDD CuRO_1_LCC_plant 29 145 IPR034288 GO:0005507
Ahy14g1650 590 Pfam Multicopper oxidase 160 308 IPR001117 -
Ahy14g1650 590 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Ahy14g1650 590 ProSitePatterns Multicopper oxidases signature 1. 528 548 IPR033138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1650 Ahy-Chr14 90194780 90206353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1650 K05909 - gmx:100814392 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1650 14 90194780 90206353 Ahy4g1473 4 79839763 79848164 hybridization
Ahy14g1650 14 90194780 90206353 Ahy12g1891 12 100139644 100144455 PCT
Ahy14g1650 14 90194780 90206353 Ahy2g1671 2 87315720 87323194 PCT