Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1671 ATGACGCGTTTTGCGTTTTATCTTGCATGGGCTTTTGCAACAATTATGCTAGTAGCTTCTTCATTGGCTTATGCTGCTGTTGTGGAACACACTTGGGATGTTGAGAACTTCAGTGTGGAGCGTTTGTGTAATCAGCATGTAATAACTGGAGTCAACGGAACCTTACCAGGGCCAGGAATTGAGGTTCAAGAGGGTGACACTGTTATTATTCATGTTAATAACAAATCACCCTATAATGTTACTATTCATTGGCATGGAATATTTCAACTTGCGAGCCAATGGTCAGATGGTCCAGAATACGTAACTCAATGTCCAATAGGTCCTGGTGGTAGTTACACATATAATTTCACAATAACAGGACAAGAAGGAACACTTTGGTGGCATGCGCATTCCTCTTTCCTTCGTGCCAATATCTATGGATCCCTTATCATTAGGCCTTCAAAAGGCAGATCATACCCATTCTCTCAAGTTCACCAAGAAGTACCCATATTGCTCGGGGAGTGGTGGAATGATAATGTTGAGGATATTGGAAATAATGCATCAAAAGGAATAGCTCCGAGAAACTCAGATGCTTACACAATTAATGGCTTGCCTGGCGATTTCTATAATTGTTCTCAAAACCAGACTTACCGGCTGAACGTGGAGCAAGGAAAGAGGTACTTGTTGCGAATTATCAATGCTGCACTGAATGAACAACACTTCTTCAAGATTGCAAACCACAGTTTGACAGTTGTAGCCATTGATGCTGGGTACACTAGAGAGTATAAGACGGACGTTATAGTATTGGCACCGGGCCAAACCGTTGATGCAATAATCACAACAAACCAAAGAGTGGGTTCTTATTACATGGCATTCAGCCCATACCGTTCCTCAAATGTAAGAAACGATACCGCAATTGCAAGGGGAGTGATTACTTATGAGGGTGCATCTTCAACATCAGCACCTATAATGCCAAACCTGCCAGATGCACATGATACGCCAACAGCACACAAGTTCTACTCTAATCTCACAGGGTTGGCTGATGGTCCTCATTGGATTCCAGTTCCACGTAAGGTGGATGAAAACATGTTCATCGCATTTGGAATTGCCCTAACCGTATGCAACCTTCCAGGACCAAGTGCATGTTTAAATGCCTTTGGGGTAAACTCACCATTCTCTGCAAGCATGAACAATGAGTCATTTGTGTTGCCTACAGGTAGAGGCTTCTCTATGTTGGAGGCATTCTACCGCAATGTTAGTGGGGTCTACACTAAAGATTTCCCAAGTCAACCTCCACTTGTGTTTAACTATACTGACCCTTCTTTAGAAACCAACACTAGCAATCCCTTGATCTTTGCACCTAAATCAACAAAGGCAAAGACATTGAAGTTTAATTCAACTGTGCAAATTGTGCTTCAAAATACAGCTATACTTGGCACCGAGAACCATCCTATTCATGTTCATGGATTTAATTTCTATGTTTTGGCTCAAGGGTTTGGGAATTATAATGCTACCATAGCCGAACCACAGTTTAATTTTGTTGATCCACAAGTGCGTAACACAATTTCTGTACCTGTCGGAGGATGGGCTGTCATCAGATTCCAAGCAAATAATCCAGGAATTTGGCTTGTGCATTGCCATTTGGAAACTCATCTACCATGGGGGCTAGCCATGAGTTTTGAGGTTGAGAATGGACCTACCCCTTCAACAAGATTGCCTCCACCACCAGCTAATCTTCCTAAGTGCTAA 1728 0.4242 MTRFAFYLAWAFATIMLVASSLAYAAVVEHTWDVENFSVERLCNQHVITGVNGTLPGPGIEVQEGDTVIIHVNNKSPYNVTIHWHGIFQLASQWSDGPEYVTQCPIGPGGSYTYNFTITGQEGTLWWHAHSSFLRANIYGSLIIRPSKGRSYPFSQVHQEVPILLGEWWNDNVEDIGNNASKGIAPRNSDAYTINGLPGDFYNCSQNQTYRLNVEQGKRYLLRIINAALNEQHFFKIANHSLTVVAIDAGYTREYKTDVIVLAPGQTVDAIITTNQRVGSYYMAFSPYRSSNVRNDTAIARGVITYEGASSTSAPIMPNLPDAHDTPTAHKFYSNLTGLADGPHWIPVPRKVDENMFIAFGIALTVCNLPGPSACLNAFGVNSPFSASMNNESFVLPTGRGFSMLEAFYRNVSGVYTKDFPSQPPLVFNYTDPSLETNTSNPLIFAPKSTKAKTLKFNSTVQIVLQNTAILGTENHPIHVHGFNFYVLAQGFGNYNATIAEPQFNFVDPQVRNTISVPVGGWAVIRFQANNPGIWLVHCHLETHLPWGLAMSFEVENGPTPSTRLPPPPANLPKC* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1671 575 Pfam Multicopper oxidase 160 309 IPR001117 -
Ahy2g1671 575 Gene3D - 378 575 IPR008972 -
Ahy2g1671 575 Pfam Multicopper oxidase 420 557 IPR011706 GO:0005507|GO:0016491
Ahy2g1671 575 ProSitePatterns Multicopper oxidases signature 1. 533 553 IPR033138 -
Ahy2g1671 575 SUPERFAMILY Cupredoxins 27 171 IPR008972 -
Ahy2g1671 575 Gene3D - 156 341 IPR008972 -
Ahy2g1671 575 PANTHER MULTI-COPPER OXIDASE 12 575 IPR045087 -
Ahy2g1671 575 CDD CuRO_1_LCC_plant 30 146 IPR034288 GO:0005507
Ahy2g1671 575 CDD CuRO_3_LCC_plant 415 558 IPR034289 GO:0005507
Ahy2g1671 575 SUPERFAMILY Cupredoxins 155 343 IPR008972 -
Ahy2g1671 575 ProSitePatterns Multicopper oxidases signature 2. 538 549 IPR002355 GO:0005507
Ahy2g1671 575 Pfam Multicopper oxidase 36 148 IPR011707 GO:0005507
Ahy2g1671 575 CDD CuRO_2_LCC_plant 161 306 IPR034285 -
Ahy2g1671 575 PANTHER LACCASE-7 12 575 - -
Ahy2g1671 575 SUPERFAMILY Cupredoxins 345 575 IPR008972 -
Ahy2g1671 575 TIGRFAM laccase: laccase 26 575 IPR017761 GO:0046274|GO:0048046|GO:0052716
Ahy2g1671 575 Gene3D - 12 146 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1671 Ahy-Chr2 87315720 87323194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1671 K05909 - gmx:100812336 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1891 12 100139644 100144455 Ahy2g1671 2 87315720 87323194 hybridization
Ahy14g1650 14 90194780 90206353 Ahy2g1671 2 87315720 87323194 PCT
Ahy4g1473 4 79839763 79848164 Ahy2g1671 2 87315720 87323194 PCT