Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0963 ATGGGTATCATGACCACCACTCACCGCAAGCGCACCCAAGAATGCATGAACTTCCCCCATTTTCAATCCCACCAGATTCCCCAATCTCCCATTCCCTCTATTTCTCATACTAAGCGACCTAAATTATCACCTTCTATTATACCCACACCTACACCCGCCACCCGACCCCTTTCCACCGCCACCACCGCCACTGGTAACCGGATCTCCCGGTACCCTGAGCCCAAGGGGCCCTTCCGCAGGGAGGTTCACGCTCCTTGCAGGCCCAATAAATTCGTTTTTTCGGGCTCCAGGGTTGCTAGGGTTACCGCATATTCGCAGCGGAACGACGAGCACATTGGTGGCGACGACACCGGCGACGGCATGGGAAACTTTTTGGCGCGAAGCTACGGGATTGTGAAGCAAGCGGTGTATGATTTCACTGGGAAGGGGAAGAAGGAGGTGGTGGAATTGGACGCTGATGAGCGCGGGCAGGACGAGGCTTCGGAGGATTTGAGCGTTCGGGAGGTTGAGAATGTCGAAATTGGGGGGGAAGGGAGGTCGCTGGTGGCGGACAAGAGGTGGATTAGGAGTGATGCAGTTGTGGTTGAGGTGCCGGAGGTGGAATTCGTAGATGCTAGGGTTGGGGACGGGGGGAAGTCAACGTCGACGGTGGTGGATTCGGAGTTGACTAATAGTGGTTTGAAGATGGTGGCGAATGATGCTGCAGGGATGGGTTTGGCTGCTCTGATCCGTGAGCATGAGCAGAACCCTGAAAATGTTCATCTTTATAAGAAGTTGCTTCTGGCAGCTGGCAGAAGAGACGACAAACTCGGGTGGCTGAGCTTTGAAATTGAGCGGAACGAGAAAAAGATAGCTGGATTTGAATTGTTGCGGCCGAAGAAGGCAGAACCAGTTGAGAAAGTACCACGTGAACCATTTCTCGCACTTACAGAGGAAGAGGAAGATGAGGTTGCAAGTGCCTTTTCAGCCAACCGAAGGAAGATCTTGGTTACACACGATGAATCCAACATTGAGATAAGTGGAGAAAAGTTTCAGTGCCTTAGGCCAGGTGCATGGTTGAACGATGAGGTGATAAATTTGTACCTTGAGTTGCTGAAAGAGAGGGAGAAAAGAGACCCACAGAGGTTTCTTAAATGCCATTTTTTCAATACATTTTTCTACAAAAAGCTAATAAGTGGCAGGAGTGGTTATGATTTCAAATCTGTCAGAAGATGGACCAGCCAAAGGAAATTAGGATATGGTCTAATTGAATGTGATAAAATTTTTGTGCCTATACATAAAGAGATCCACTGGTGCTTGGCTATTATCAATAAGAAAGATCAGAAATTCCAGTATCTTGACTCATTGAAAGGAATGGACAACCAAGTGCTGAAAGTACTGGCTAGATATTATGTGGACGAGGTGAAGGACAAGACTGGTAAAGACCTAGATGTGAGTTCTTGGGAAAAAGAATTCGTTGAAGACCTTCCTGAGCAGGAGAATGGGTATGATTGTGGGGTGTTTATGATCAAATATGCCGACTTCTATAGTAGAGGCCTGGGGCTGTGTTTTAACCAGGAACATATGCCCTACTTCCGCCAGAGGACAGCTAAGGAGATATTGAGATTGAGAGCTGAATAA 1620 0.4821 MGIMTTTHRKRTQECMNFPHFQSHQIPQSPIPSISHTKRPKLSPSIIPTPTPATRPLSTATTATGNRISRYPEPKGPFRREVHAPCRPNKFVFSGSRVARVTAYSQRNDEHIGGDDTGDGMGNFLARSYGIVKQAVYDFTGKGKKEVVELDADERGQDEASEDLSVREVENVEIGGEGRSLVADKRWIRSDAVVVEVPEVEFVDARVGDGGKSTSTVVDSELTNSGLKMVANDAAGMGLAALIREHEQNPENVHLYKKLLLAAGRRDDKLGWLSFEIERNEKKIAGFELLRPKKAEPVEKVPREPFLALTEEEEDEVASAFSANRRKILVTHDESNIEISGEKFQCLRPGAWLNDEVINLYLELLKEREKRDPQRFLKCHFFNTFFYKKLISGRSGYDFKSVRRWTSQRKLGYGLIECDKIFVPIHKEIHWCLAIINKKDQKFQYLDSLKGMDNQVLKVLARYYVDEVKDKTGKDLDVSSWEKEFVEDLPEQENGYDCGVFMIKYADFYSRGLGLCFNQEHMPYFRQRTAKEILRLRAE* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0963 539 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 59 538 - -
Ahy4g0963 539 MobiDBLite consensus disorder prediction 22 44 - -
Ahy4g0963 539 Gene3D Adenoviral Proteinase; Chain A 297 536 - -
Ahy4g0963 539 MobiDBLite consensus disorder prediction 22 61 - -
Ahy4g0963 539 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 59 538 - -
Ahy4g0963 539 ProSiteProfiles Ubiquitin-like protease family profile. 337 509 IPR003653 GO:0006508|GO:0008234
Ahy4g0963 539 Pfam Ulp1 protease family, C-terminal catalytic domain 352 533 IPR003653 GO:0006508|GO:0008234
Ahy4g0963 539 SUPERFAMILY Cysteine proteinases 305 537 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0963 Ahy-Chr4 18333987 18338958 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0963 K08592 - jre:108994812 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1058 14 18424225 18429174 Ahy4g0963 4 18333987 18338958 hybridization
Ahy11g2561 11 141588614 141591704 Ahy4g0963 4 18333987 18338958 PCT
Ahy1g2361 1 101673944 101677837 Ahy4g0963 4 18333987 18338958 PCT
Ahy4g0963 4 18333987 18338958 Ahy11g2561 11 141588614 141591704 PCT
Ahy4g0963 4 18333987 18338958 Ahy1g2361 1 101673944 101677837 PCT