Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2561 ATGGGTCTCATTAGTAGTAGCAACAACAAACGGCACCAACAGTGCATGAATTTGAATCGCATGTATCCGTCTCCGAATTCCTCAGATTCCCGCACATTAAAAAGAGCTAAGTTCCAATCAACGAGCATGAACTCAACTCCTTTAAGATCATCTCCCACTAGTACTGGTTCAAGAGTTTCCCGGTACCCAAATGCAGTGCTACCGTTGCATAGGGAGGTTCACGCTCCTTGCAGATCCAAAAAGTTCGGTCTTTTGAATATTTCAGGAACTCAGAAGGAGATTGGTAAGGGTAGGGGCAATGATGCGTTGCATAACAAGTACCGCGTGTACCAGCAGGCGAAGGATTCTGCACTTGCTTGCATTCGATTATTTGAAAAGCGCAAGGAGGCGGCGCAAGTCGACACTGCTGGTCGCAACAAGGAGGTTTATGTCATAGAAGATGATGACGAAGAAGGACCATCCATTGTGACAGAACAGAGTTTGAAAGGGGATGATATGGCTTTGACTGGGATGCATGATTTTGATGCTAAGGATGTTGTAGGATTTTTGCAGCAATCAACTCCTTTGGTTTCTGAGTCCATAAATAGTAATTTGAATGTGGTTTATGCTGAGAGGACGCTGGACACTCTATCCTTGAGCCCCGAGCATCCGAAGAAGGAACCACTTGTAGAGCTGGTGTCACTGAAACCTTTTGTTCCTCTTACAAAGGAGGAAGAAGATGAGGTTGCACGTGCCTTTTCTGCTGACAGGAAGAAGGTTTTGGTCACCCATTATAAATCCAACATTGAGATCACAGGCGGAACGTTTCAGTGCCTCAGGCGGGGTGGATGGTTAAATGACAAGGTGATAGATTTGTACCTGGTACTTCTGAAAGAGAGGGAGAGAAGGAAGGCAAAGAATTCTCTCCAATGTCATTTTTTCAGTACCTTTTTCTACACAAAGTGGCAGTTGATAAGTGGGAAGAATGGTTATGATTTCAACTCTGTAAGGAGATGGACCAGTCAAAAGAAACTGGGATACATCCCCCATGAATGCGATAAAATATTTGTACCTATTCATCGAACGTCTCATTGGTGTTTGGCTGTCATCAATCAAAAAGAGAAAAAATTCCAGTATCTTGACTCTCTGAGAGGAACAGATACCCAAGTGCTGGAAGTGCTGGCTAGGTATTTTGTAGATGAAGTAAAGGACAAGACTGGAAAAGACACCGATGTAAGTTCTTGGGAGAAAGAATTTGTCAAAGACCATCCTAAACAATTGAATTGCTATGATTGTGGGATGTTTATGATCAAATATGCTGATTTCTACAGTAGAAATATGAGATTGTGTTTTGGCCAGATTGAGGATTGGACTGACCAAGTGACTATCAGGATTCTGGATTCCAACCAGGTATATCCACAATGGTAG 1407 0.43 MGLISSSNNKRHQQCMNLNRMYPSPNSSDSRTLKRAKFQSTSMNSTPLRSSPTSTGSRVSRYPNAVLPLHREVHAPCRSKKFGLLNISGTQKEIGKGRGNDALHNKYRVYQQAKDSALACIRLFEKRKEAAQVDTAGRNKEVYVIEDDDEEGPSIVTEQSLKGDDMALTGMHDFDAKDVVGFLQQSTPLVSESINSNLNVVYAERTLDTLSLSPEHPKKEPLVELVSLKPFVPLTKEEEDEVARAFSADRKKVLVTHYKSNIEITGGTFQCLRRGGWLNDKVIDLYLVLLKERERRKAKNSLQCHFFSTFFYTKWQLISGKNGYDFNSVRRWTSQKKLGYIPHECDKIFVPIHRTSHWCLAVINQKEKKFQYLDSLRGTDTQVLEVLARYFVDEVKDKTGKDTDVSSWEKEFVKDHPKQLNCYDCGMFMIKYADFYSRNMRLCFGQIEDWTDQVTIRILDSNQVYPQW* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2561 468 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 198 446 - -
Ahy11g2561 468 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 37 152 - -
Ahy11g2561 468 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 37 152 - -
Ahy11g2561 468 Pfam Ulp1 protease family, C-terminal catalytic domain 277 440 IPR003653 GO:0006508|GO:0008234
Ahy11g2561 468 SUPERFAMILY Cysteine proteinases 230 447 IPR038765 -
Ahy11g2561 468 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 198 446 - -
Ahy11g2561 468 Gene3D Adenoviral Proteinase; Chain A 231 462 - -
Ahy11g2561 468 MobiDBLite consensus disorder prediction 18 59 - -
Ahy11g2561 468 ProSiteProfiles Ubiquitin-like protease family profile. 262 436 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2561 Ahy-Chr11 141588614 141591704 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2561 K08592 - gmx:100805645 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2561 11 141588614 141591704 Ahy11g2561 11 141588614 141591704 ECH
Ahy11g2561 11 141588614 141591704 Ahy1g2361 1 101673944 101677837 hybridization
Ahy11g2561 11 141588614 141591704 Ahy14g1058 14 18424225 18429174 PCT
Ahy11g2561 11 141588614 141591704 Ahy4g0963 4 18333987 18338958 PCT
Ahy14g1058 14 18424225 18429174 Ahy11g2561 11 141588614 141591704 PCT
Ahy4g0963 4 18333987 18338958 Ahy11g2561 11 141588614 141591704 PCT