Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2361 ATGGGTCTCATTAGTAGTAGCAACAACAAACGCCACCAACAGTGCATGAATTTGAATCGCATGTATCCGTCTCCGAGTTCCTCAGATTCCCGCACATTAAAAAGAGCTAAGTTCCAATCAACGAGCATGAACTCAACTCCCACTAGTACTGGTTCAAGAGTTTCCCGGTACCCAAATGCAGTGCTACCGTTGCATAGGGAGGTTCACGCTCCTTGCAGATCCAAAAAGTTCGGTCTTTTGAATATTTCAGGAACTCAGAAGGAGATTGGTAAGGGTAGGGGCAATGATGCGTTGCATCACAAGTACCGCGTGTACCAGCAGGCGAAGGATTCTGCACTTGCTTGCATTCGATTATTTGAAAAGCGCAAGGAGGCGGCGCAAGTTTACACTGCTGGTCGCAACAAGGAGGTTTATGTCATAGAAGATGATGACGAAGAAGGACCATCTATGGTGACAGAACAGAGTTTGAAAGGGATGCATGATTTTGATGCTAAGGATGTTGTAGGATTTTTGCAGCAATCAACTCCTTTGGTTTCTGAGTCCATAAATAGTAATTTGAATGTGGTTTATGCTGAGAGGATGCTGGACACTCTATCCTTAAGCCCCGAGCATCCGAAGAAGGAACCACTTGTAGAGCTAGTGTCACTGAAACCTTTTGTTCCTCTTACAAAGGAGGAAGAAGATGAGGTTGCACGTGCCTTTTCTGCTGACAGGAAGAAGGTTTTGGTCACTCATTATAAATCCAACATTGAGATCACAGGCGGAACGTTTCAGTGCCTCAGGCCGGGTGGATGGTTAAATGACAAGGTCATAGATTTGTACCTGGTACTTCTGAAAGAGAGGGAGAGAAGGAAGGCAAAGAATTCTCTCCAATGTCATTTTTTCAGTACCTTTTTCTACACAAAGTTGATAAGTGGGAAGAATGGTTATGATTTCAACTCTGTAAGGAGATGGACCAGTCAAAAGAAACTGGGATACATCCCCCATGAATGCGATAAAATATTTGTACCTATTCATCGAACGTCTCATTGGTGTTTGGCTGTCATCAATCAAAAAGAGAAAAAATTCCAGTATCTTGACTCTCTGAGAGGAAAAGATACCCAAGTGCTGGAAGTGCTGGCTAGGTATTTTGTAGATGAAGTAAAGGACAAGACTGGAAAAGACACCGATGTAAGTTCTTGGGAGAAAGAATTTGTCAAAGACCATCCTAAACAATTGAATTGCTATGATTGTGGGATGTTTATGATCAAATATGCTGATTTCTACAGTAGAAATATGAGATTGTGTTTTGGCCAGATTGAGGATTGGACTGACCAAGTGACTATCAGGATTCTGGATTCCAACCAGGTATATCCACAATGGTAG 1365 0.4256 MGLISSSNNKRHQQCMNLNRMYPSPSSSDSRTLKRAKFQSTSMNSTPTSTGSRVSRYPNAVLPLHREVHAPCRSKKFGLLNISGTQKEIGKGRGNDALHHKYRVYQQAKDSALACIRLFEKRKEAAQVYTAGRNKEVYVIEDDDEEGPSMVTEQSLKGMHDFDAKDVVGFLQQSTPLVSESINSNLNVVYAERMLDTLSLSPEHPKKEPLVELVSLKPFVPLTKEEEDEVARAFSADRKKVLVTHYKSNIEITGGTFQCLRPGGWLNDKVIDLYLVLLKERERRKAKNSLQCHFFSTFFYTKLISGKNGYDFNSVRRWTSQKKLGYIPHECDKIFVPIHRTSHWCLAVINQKEKKFQYLDSLRGKDTQVLEVLARYFVDEVKDKTGKDTDVSSWEKEFVKDHPKQLNCYDCGMFMIKYADFYSRNMRLCFGQIEDWTDQVTIRILDSNQVYPQW* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2361 454 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 26 146 - -
Ahy1g2361 454 Gene3D Adenoviral Proteinase; Chain A 219 448 - -
Ahy1g2361 454 Pfam Ulp1 protease family, C-terminal catalytic domain 265 426 IPR003653 GO:0006508|GO:0008234
Ahy1g2361 454 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 186 432 - -
Ahy1g2361 454 MobiDBLite consensus disorder prediction 19 55 - -
Ahy1g2361 454 ProSiteProfiles Ubiquitin-like protease family profile. 250 422 IPR003653 GO:0006508|GO:0008234
Ahy1g2361 454 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 186 432 - -
Ahy1g2361 454 SUPERFAMILY Cysteine proteinases 218 433 IPR038765 -
Ahy1g2361 454 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 26 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2361 Ahy-Chr1 101673944 101677837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2361 K08592 - gmx:100797013 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2561 11 141588614 141591704 Ahy1g2361 1 101673944 101677837 hybridization
Ahy1g2361 1 101673944 101677837 Ahy14g1058 14 18424225 18429174 PCT
Ahy1g2361 1 101673944 101677837 Ahy4g0963 4 18333987 18338958 PCT
Ahy14g1058 14 18424225 18429174 Ahy1g2361 1 101673944 101677837 PCT
Ahy4g0963 4 18333987 18338958 Ahy1g2361 1 101673944 101677837 PCT