Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0812 ATGGCTAAAACTCTTCACATTACTTTTACCATTACCATCATTCTCCTCTTTTCTTCTTCTTCTATTCCCTGCACACAATCCCAAACCACCAGAGAGTACTACTATTGGAATGAGAACAACGGTGTTGAAGATCTAATAGACCAAGTATGCAAAAGAACACCCTTTTATGACTTATGCATTTCCACACTCCACAACAACCCTCTTCTAAGCCCCAAGAGTGACATCAAACAAGTAGCACTCATAATGGTCAACAACATTCTGTCAAATGCAACTGACACACTCAATTACATTGAAGCCCTTTTGAAGCACACAAAGGACCCCCAATTGGAACAAGCTTTGGCTCTTTGTGCTGAGTCATATATCCCTGTTGTGAGGTTCACTCTTCCACAAGCTGCTGTGGCTATAAGCCAGGGACACTTTGCCTTTGCAAGTTACTGCATTTCTGATGCTGTTAAGGAAGTTAATTCCTGTGAGGGTAGATTGGTGAAATCACCTTCTGATAAGTCACCTTTGGGTGATAGGAATGATGTTGTTCAGAAGCTTGTTGACGTTGCTAATGCCATTATCAAATTGCTTTTGAAGGCTTGA 588 0.4116 MAKTLHITFTITIILLFSSSSIPCTQSQTTREYYYWNENNGVEDLIDQVCKRTPFYDLCISTLHNNPLLSPKSDIKQVALIMVNNILSNATDTLNYIEALLKHTKDPQLEQALALCAESYIPVVRFTLPQAAVAISQGHFAFASYCISDAVKEVNSCEGRLVKSPSDKSPLGDRNDVVQKLVDVANAIIKLLLKA* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0812 195 SMART PMEI_2 41 188 IPR006501 GO:0004857
Ahy4g0812 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 39 194 - -
Ahy4g0812 195 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 192 IPR006501 GO:0004857
Ahy4g0812 195 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 39 194 - -
Ahy4g0812 195 CDD CIF_like 43 192 IPR034087 GO:0004857|GO:0043086
Ahy4g0812 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 193 IPR035513 -
Ahy4g0812 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 192 IPR035513 -
Ahy4g0812 195 Pfam Plant invertase/pectin methylesterase inhibitor 44 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0812 Ahy-Chr4 12617631 12618603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0812 - - gmx:100527840 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0900 14 14483290 14484181 Ahy4g0812 4 12617631 12618603 hybridization
Ahy11g2681 11 143166847 143167404 Ahy4g0812 4 12617631 12618603 PCT
Ahy1g2258 1 100468172 100469016 Ahy4g0812 4 12617631 12618603 PCT
Ahy4g0812 4 12617631 12618603 Ahy11g2688 11 143225121 143225639 PCT
Ahy4g0812 4 12617631 12618603 Ahy1g2254 1 100430898 100431416 PCT