Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2258 ATGAAGAATAAGGCCTCAACATCTTTAACACTTGTTCTTCTCTGCTTGACTCTTGTATCCACAAGATTAGTGAGTAGCCAATCATCTTCAGATGATGGTGGTGATGATTTGATAGACCAAATATGCAAGAAGACACCATTCTATGAACTCTGCAGCAGCATCCTCCATTCAAATCCTCTCACCCCAAAGAGTGATCCAAAGGGTATGGCTGTTATAATGGTGAACAACATTGAAGAAAATGCCACTGACACTCTCAACTACATTCAAGACCTCATTAAGAAAACCTCTGATCAACAATTGGAGCAACAATTGGCCTTTTGTGCTGAGTCTTATATCCCTGTTGTTAAGTATATTCTTCCTCAAGCTGTTGATGCTTTGAAACAAGGCAAATTTGGCTTTGCAAGTTACTGTATTTCTGATGCTGAGAAAGAACTTGATGCTTGCAACAAGAAATTCTCTGGGAATCAGTCTCCTTTGGGTGATAGGAATGGGATTATGCAGAAGCTTGTTGATGTTGCTGCTGCAATTGTTAAGCTTTTGTTAAATGGCTGA 552 0.3949 MKNKASTSLTLVLLCLTLVSTRLVSSQSSSDDGGDDLIDQICKKTPFYELCSSILHSNPLTPKSDPKGMAVIMVNNIEENATDTLNYIQDLIKKTSDQQLEQQLAFCAESYIPVVKYILPQAVDALKQGKFGFASYCISDAEKELDACNKKFSGNQSPLGDRNGIMQKLVDVAAAIVKLLLNG* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2258 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 180 IPR035513 -
Ahy1g2258 183 SMART PMEI_2 33 176 IPR006501 GO:0004857
Ahy1g2258 183 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 180 IPR006501 GO:0004857
Ahy1g2258 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 181 IPR035513 -
Ahy1g2258 183 Pfam Plant invertase/pectin methylesterase inhibitor 36 176 IPR006501 GO:0004857
Ahy1g2258 183 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 14 183 - -
Ahy1g2258 183 CDD CIF_like 37 180 IPR034087 GO:0004857|GO:0043086
Ahy1g2258 183 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2258 Ahy-Chr1 100468172 100469016 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2258 - - gmx:100820305 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2681 11 143166847 143167404 Ahy1g2258 1 100468172 100469016 hybridization
Ahy1g2258 1 100468172 100469016 Ahy14g0900 14 14483290 14484181 PCT
Ahy1g2258 1 100468172 100469016 Ahy4g0812 4 12617631 12618603 PCT