Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2688 ATGAAGCATTTTTCTCTAAATACATTATTGTGCATAATTGTTGTGGCTTCAATTGCAATAGCACCATGTGAAAGCGATGACAAACTCATAACACAAACATGCAGCAAGACACCATACCCTGCCCAATGTGTTAGTTACATAAAAGCTGATTATAAAAGCAAGGATGTTAGGGATGTTCCAGGTCTTGGAATAATCATGGCACAAGTTTTGGAACTCAAAGCACATGCTCCCAAAGACATTCTCTTCACATTGCTTGGGGTGGGAAAGAGACCAGATATTCAGGTTCAGTTGAAAGCTTGTCTTGAAAGTTACAATTTTATTATCAATACTGCTATGCCTGCAGCCATTGATTCTTTCAAAATTGGGAAACCCCGTTTGGCTGAAGATTATGCTAACACTGCTGCAATTGTGGTTAGTAAATGTGAGAAAAGATTCAATGGAAAATCGCCAATCACTAATGAGAACAATATTACTCATGAAATTGCTCGCATCCTAGGAGCTATTGCTAAACAATTATAG 519 0.3776 MKHFSLNTLLCIIVVASIAIAPCESDDKLITQTCSKTPYPAQCVSYIKADYKSKDVRDVPGLGIIMAQVLELKAHAPKDILFTLLGVGKRPDIQVQLKACLESYNFIINTAMPAAIDSFKIGKPRLAEDYANTAAIVVSKCEKRFNGKSPITNENNITHEIARILGAIAKQL* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2688 172 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 14 171 - -
Ahy11g2688 172 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 172 IPR035513 -
Ahy11g2688 172 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 172 IPR035513 -
Ahy11g2688 172 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 171 - -
Ahy11g2688 172 Pfam Plant invertase/pectin methylesterase inhibitor 29 164 IPR006501 GO:0004857
Ahy11g2688 172 SMART PMEI_2 25 168 IPR006501 GO:0004857
Ahy11g2688 172 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2688 Ahy-Chr11 143225121 143225639 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2688 - - ahf:112722081 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2688 11 143225121 143225639 Ahy1g2254 1 100430898 100431416 hybridization
Ahy14g0900 14 14483290 14484181 Ahy11g2688 11 143225121 143225639 PCT
Ahy4g0812 4 12617631 12618603 Ahy11g2688 11 143225121 143225639 PCT