Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4198 ATGCAGGGGAACGAGAGAACAAAGACTCGCTACTACAATCTCCTCCCAGAAAACCGATGCTTCGTCTGGCTACTCACCGGACTTGCCATCATCGCCGCCTCCCTCTTCACAGCCACCACACTTCTTCAAACCTCTGACACCACCTTCCTCTGCCCGCTCACAACTAAAACCCGCTTCGCCTCCGCCCAGCAGTCCACCGCAGCCACCACAACGCCGCTCCAGCTCCGAGCAATACTCCACTACGCCACCTCCCACGTCGTGCCTCAGCAGTCCCTGTCTGAGATCACCATAACCTTCGACGTCTTCAAATCCCTGCAGCACAGACCCCTCAACTTCCTCGTCTTCGGCCTCGGCCACGACTCTCTCATGTGGGCCAGCCTCAACCCAACCGGCACCACCCTCTTCTTGGAAGAGGACCCTAAGTGGTTCCACACCATTCTCGCCGCCGCCCCCGACCTCCACGCCCACACCGTCCGCTACCGGACACAGCTCCAGGAGGCTGATGAGCTTCTCCAGCACTACAGGAAGGAGGAGGCGTGCTGGCCGGCGCGTGCCACCCTGAAAGGGAACGACAAGTGCAGGCTTGCACTTCACGATCTGCCGGAGGAGGTGTACGAGAGGGAGTGGGATCTGGTGATGATTGACGCGCCGAGAGGGTACTTTGCAGAGGCGCCGGGGAGGATGGCGGCGATATTCTCGGCGGCAGTGATGGCGAGGGGGAGAAAAGGATCCGGTGTGACGCACGTGTTCCTACACGATGTGAATCGGAGGGTAGAGAAGCTGTACGCGGAAGAGTTCCTGTGTAGGAAGAATCTTGTGAAAGGTGTTGGCAGGCTATGGCATTTCCAGATTCCGGCCGTGCCTAACACCACCGCTGTCGTTCCCGATCACGTTGATGCTCATCGTTTTTGTTAA 915 0.588 MQGNERTKTRYYNLLPENRCFVWLLTGLAIIAASLFTATTLLQTSDTTFLCPLTTKTRFASAQQSTAATTTPLQLRAILHYATSHVVPQQSLSEITITFDVFKSLQHRPLNFLVFGLGHDSLMWASLNPTGTTLFLEEDPKWFHTILAAAPDLHAHTVRYRTQLQEADELLQHYRKEEACWPARATLKGNDKCRLALHDLPEEVYEREWDLVMIDAPRGYFAEAPGRMAAIFSAAVMARGRKGSGVTHVFLHDVNRRVEKLYAEEFLCRKNLVKGVGRLWHFQIPAVPNTTAVVPDHVDAHRFC* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4198 304 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 8 290 - -
Ahy3g4198 304 Gene3D Vaccinia Virus protein VP39 89 297 IPR029063 -
Ahy3g4198 304 Pfam Polysaccharide biosynthesis 94 282 IPR021148 -
Ahy3g4198 304 PANTHER OS11G0490100 PROTEIN 8 290 IPR006514 GO:0045492
Ahy3g4198 304 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 76 289 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4198 Ahy-Chr3 141977893 141979205 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4198 - - gmx:100820087 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4480 13 145031229 145032508 Ahy3g4198 3 141977893 141979205 hybridization
Ahy20g0936 20 12593151 12594570 Ahy3g4198 3 141977893 141979205 PCT
Ahy10g0664 10 7090661 7091869 Ahy3g4198 3 141977893 141979205 PCT
Ahy3g4198 3 141977893 141979205 Ahy20g0936 20 12593151 12594570 PCT
Ahy3g4198 3 141977893 141979205 Ahy10g0664 10 7090661 7091869 PCT