Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4480 ATGCAGGGGAACGAGAGAACAAAGAGTCGCTACTACAACCTCCTCCCAGAAAACCGATGCTTCGTCTGGCTACTCACCGGACTTGCCATCATCGCCGCCTCCCTCTTCACAGCCACCACACTTCTCCAAACCTCTGACACCACCTTCCTCTGCCCGCTCACAACTAAAACCCGCTTCGCCTCCGCCCAGCAGTCCACCGCAGCCACCACAACGCCGCTCCAGCTCCGAGCAATACTCCACTACGCCACCTCCCACGTGGTGCCTCAGCAGTCCCTCTCCGAGATCACCATAACCTTCGACGTCTTCAAATCCCTGCAGCACAGACCCCTCAACTTCCTCGTCTTCGGCCTCGGCCACGACTCTCTCATGTGGGCCAGCCTCAACCCCACCGGCACCACCCTCTTCTTGGAAGAGGACCCTAAGTGGTTCCACACCGTTCTCGCCGCCGCCCCTGACCTCCACGCCCACACCGTCCGCTACCGGACACAGCTCCAGGAGGCTGATGAGCTTCTCCAGCACTACAGGAAGGAGGAGGCGTGCTGGCCGGCGCGTGCCACTCTGAAAGGGAACGACAAGTGCAGGCTTGCACTTCACGATCTGCCGGAGGAGGTGTACGAGAGGGAGTGGGATCTGGTGATGATTGACGCGCCGAAAGGGTACTTTGCAGAGGCGCCGGGGAGGATGGCGGCGATATTCTCGGCGGCAGTGATGGCCAGGGGGAGAAAAGGATCCGGTGTGACGCACGTGTTCCTACACGATGTGAATCGGAGGGTAGAGAAGCTGTATGCGGAAGAGTTCCTGTGTAAGAAGAATCTTGTGAAAGGTGTTGGCAGGCTATGGCATTTCCAGATTCCGGCCGTGGCTAACACCACCGCTGTCGTTCCCGATCACGATGATGCTCATCGTTTTTGTTAA 915 0.588 MQGNERTKSRYYNLLPENRCFVWLLTGLAIIAASLFTATTLLQTSDTTFLCPLTTKTRFASAQQSTAATTTPLQLRAILHYATSHVVPQQSLSEITITFDVFKSLQHRPLNFLVFGLGHDSLMWASLNPTGTTLFLEEDPKWFHTVLAAAPDLHAHTVRYRTQLQEADELLQHYRKEEACWPARATLKGNDKCRLALHDLPEEVYEREWDLVMIDAPKGYFAEAPGRMAAIFSAAVMARGRKGSGVTHVFLHDVNRRVEKLYAEEFLCKKNLVKGVGRLWHFQIPAVANTTAVVPDHDDAHRFC* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4480 304 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 8 291 - -
Ahy13g4480 304 Pfam Polysaccharide biosynthesis 94 282 IPR021148 -
Ahy13g4480 304 Gene3D Vaccinia Virus protein VP39 89 294 IPR029063 -
Ahy13g4480 304 PANTHER OS11G0490100 PROTEIN 8 291 IPR006514 GO:0045492
Ahy13g4480 304 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 76 290 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4480 Ahy-Chr13 145031229 145032508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4480 - - gmx:100820087 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4480 13 145031229 145032508 Ahy3g4198 3 141977893 141979205 hybridization
Ahy20g0936 20 12593151 12594570 Ahy13g4480 13 145031229 145032508 PCT
Ahy10g0664 10 7090661 7091869 Ahy13g4480 13 145031229 145032508 PCT
Ahy13g4480 13 145031229 145032508 Ahy20g0936 20 12593151 12594570 PCT
Ahy13g4480 13 145031229 145032508 Ahy10g0664 10 7090661 7091869 PCT