Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0936 ATGAGAAATAACAGGAATTCTCTACCAGAGAGAAGGTGGTTCCTAGGCCTGGCCATAGTGGGCCTGGTCGGAGCTGCAGTCTTCATAGTCGTAATGATCCTAACCTCCGACTCCTCCTTAATATGCCCGACGGAACCAATCTACGGTGAAATGCCCAAAGCCCAGGCCCGAGTCCAGGAAGACTACAACCCAACGACGATCCAGCTGAAGGCCATACTCCACTACGCCACGTCACGCATTGTCCCGCAACAATCTCTTGCAGAGATCAAGATCAGCTTCGACGTCCTCAAATCAATGGGCCGGCCATGCAACTTCCTGGTCTTCGGTCTGGGTCACGACTCCCTCATGTGGGCCTCTCTGAACCCGGGCGGAACAACTCTCTTCCTGGAAGAGGATCCTAAATGGGTTCAAACCGTACTCAAGGATGCCCCGTCCCTGCGGGCCCACACTGTCCGGTATCGCACGCGCCTAAGGGACGCGGACCAACTGCTCTTGTCTTACCGCTCCGAGCCCACCTGCGGCCCGGCGGGGGCCCACTTACGTGACAATGTTGAGTGCGAGCTGGCTCTTCACAACCTCCCCGATCAGGTGTATGAGACGGAGTGGGATCTGGTGATGATCGACGCGCCTCGCGGATACTTCCCGGACGCGCCGGGGAGGATGGCGGCGGTGTACTCTGTGGCGGTCATGGCGAGAGGGAGAAAAGGATCCGGTGTGACGCACGTGTTCCTTCACGATGTTGATCGGAGGGTGGAGAAGGTTTATGCTGAGGAGTTTCTTTGTAGGAAGTATCTGGTGAGAGGTGTTGGCAGGCTTTGGCATTTCCAGATACCGCCTTCAAATGACTCTCATACTTCTCAACGTTTCTGTTAA 873 0.5601 MRNNRNSLPERRWFLGLAIVGLVGAAVFIVVMILTSDSSLICPTEPIYGEMPKAQARVQEDYNPTTIQLKAILHYATSRIVPQQSLAEIKISFDVLKSMGRPCNFLVFGLGHDSLMWASLNPGGTTLFLEEDPKWVQTVLKDAPSLRAHTVRYRTRLRDADQLLLSYRSEPTCGPAGAHLRDNVECELALHNLPDQVYETEWDLVMIDAPRGYFPDAPGRMAAVYSVAVMARGRKGSGVTHVFLHDVDRRVEKVYAEEFLCRKYLVRGVGRLWHFQIPPSNDSHTSQRFC* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0936 290 Pfam Polysaccharide biosynthesis 87 275 IPR021148 -
Ahy20g0936 290 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 3 290 - -
Ahy20g0936 290 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 69 290 IPR006514 GO:0045492
Ahy20g0936 290 PANTHER OS11G0490100 PROTEIN 3 290 IPR006514 GO:0045492
Ahy20g0936 290 Gene3D Vaccinia Virus protein VP39 80 288 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0936 Ahy-Chr20 12593151 12594570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0936 - - gmx:100791951 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0936 20 12593151 12594570 Ahy20g0936 20 12593151 12594570 ECH
Ahy20g0936 20 12593151 12594570 Ahy10g0664 10 7090661 7091869 hybridization
Ahy20g0936 20 12593151 12594570 Ahy13g4480 13 145031229 145032508 PCT
Ahy20g0936 20 12593151 12594570 Ahy3g4198 3 141977893 141979205 PCT
Ahy13g4480 13 145031229 145032508 Ahy20g0936 20 12593151 12594570 PCT
Ahy3g4198 3 141977893 141979205 Ahy20g0936 20 12593151 12594570 PCT