Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4175 ATGTATTATTACAAATTCCCAATCATGCATTCATCAATCTTTACCAATTATCCTCTCATTTCCTCCATCGTTGCTTTCTTCATTGCTCAATCCATCAAGTTTTTCACCACTTGGTACAAGGAAAGAAGATGGGATGTGAAGCAATTTGTTGGGTCTGGTGGAATGCCATCTTCTCATTCAGCAACTGTCACTGCTCTCACTGCTTCCGTTGGCTTCCAAGAAGGATTTGGAGGACCTCTTTTTGCCACCGCCTTGGTTTTAGCTCTTATTGTGATGTATGATGCCACCGGTGTAAGATTGCAGGCAGGACGCCAAGCAGAGGTTCTGAACCAAATTGTATACGAACTTCCTGCTGAACATCCTTTGGCCGAAAGCAGACCACTTCGTGAGCTTCTTGGACACACACCCCCTCAGGTCATGGCCGGTGGGTTACTTGGAATATTAACTGCAGTAATTGGTCACCTAATAACCGTGGCTAGTAGTTAA 486 0.4465 MYYYKFPIMHSSIFTNYPLISSIVAFFIAQSIKFFTTWYKERRWDVKQFVGSGGMPSSHSATVTALTASVGFQEGFGGPLFATALVLALIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVMAGGLLGILTAVIGHLITVASS* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4175 161 Pfam Divergent PAP2 family 15 148 IPR003832 -
Ahy3g4175 161 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 10 159 IPR003832 -
Ahy3g4175 161 PANTHER - 10 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4175 Ahy-Chr3 141694489 141696758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4175 K09775 - gmx:100815344 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4457 13 144691096 144693065 Ahy3g4175 3 141694489 141696758 hybridization
Ahy20g0986 20 14338692 14341637 Ahy3g4175 3 141694489 141696758 PCT
Ahy10g0707 10 7947446 7950403 Ahy3g4175 3 141694489 141696758 PCT
Ahy3g4175 3 141694489 141696758 Ahy20g0986 20 14338692 14341637 PCT
Ahy3g4175 3 141694489 141696758 Ahy10g0707 10 7947446 7950403 PCT