Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4457 ATGCATTATTACAAATTCCCAATCATGCATTCATCAATCTTTACCAATTATCCTCTCATTTCCTCCATCGTTGCTTTCTTCATTGCTCAATCCATCAAGTTTTTCACCACTTGGTACAAGGAAAGAAGATGGGATGTGAAGCAATTTGTTGGGTCTGGTGGAATGCCATCTTCTCATTCAGCAACTGTCACTGCTCTCACTGCTTCCGTTGGCTTCCAAGAAGGATTTGGAGGACCTCTTTTTGCCACCGCCTTGGTTTTAGCTCTTATTGTGATGTATGATGCCACCGGTGTAAGATTGCAGGCAGGACGCCAAGCAGAGGTTCTGAACCAAATTGTATACGAACTTCCTGCTGAACATCCCTTGGCCGAAAGCAGACCACTTCGTGAGCTTCTTGGACACACACCCCCTCAGGTCATGGCCGGTGGGTTACTTGGAATATTAACTGCAGTAATTGGTCACCTAATAACCGTGGCTAGTAGTTAA 486 0.4506 MHYYKFPIMHSSIFTNYPLISSIVAFFIAQSIKFFTTWYKERRWDVKQFVGSGGMPSSHSATVTALTASVGFQEGFGGPLFATALVLALIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVMAGGLLGILTAVIGHLITVASS* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4457 161 PANTHER - 10 159 - -
Ahy13g4457 161 Pfam Divergent PAP2 family 15 148 IPR003832 -
Ahy13g4457 161 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 10 159 IPR003832 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4457 Ahy-Chr13 144691096 144693065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4457 K09775 - gmx:100815344 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4457 13 144691096 144693065 Ahy3g4175 3 141694489 141696758 hybridization
Ahy20g0986 20 14338692 14341637 Ahy13g4457 13 144691096 144693065 PCT
Ahy10g0707 10 7947446 7950403 Ahy13g4457 13 144691096 144693065 PCT
Ahy13g4457 13 144691096 144693065 Ahy20g0986 20 14338692 14341637 PCT
Ahy13g4457 13 144691096 144693065 Ahy10g0707 10 7947446 7950403 PCT