Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0986 ATGGATGAAGCGTCAGGGTTTGGTGCTACGACGTCGTCTTCAATGTTTAGGAATTTCCCTCTCATATCGGCATTCGTTGCTTTCGCCTTAGCTCAATCCATCAAGTTTTTCACTACCTGGTACAAAGAGAGGAGATGGGATCCCAAGCAACTAGTTGGATCTGGGGGAATGCCGTCGTCTCATTCGGCTACTGTGACGGCTCTTGCAGCCGCCGTTGGGTTCCAGGATGGCTTTGGAGGACCACTTTTCGCTACAGCGTTGGTTTTAGCTTGCATTGTAATGTATGATGCTACTGGCGTAAGAATGCAAGCTGGGCGCCAAGCAGAGGTTTTGAACCAAATTGTTTATGAACTTCCTGCCGAACATCCTCTGGCTGAAAGCAGACCTCTTCGTGAACTTCTTGGGCATACACCCCCGCAGGTTGTCGCTGGTGGAATACTGGGACTTGTAACAGCGGTTATGGGTCGTCTAATAACAATGGCTTGGTAG 489 0.4949 MDEASGFGATTSSSMFRNFPLISAFVAFALAQSIKFFTTWYKERRWDPKQLVGSGGMPSSHSATVTALAAAVGFQDGFGGPLFATALVLACIVMYDATGVRMQAGRQAEVLNQIVYELPAEHPLAESRPLRELLGHTPPQVVAGGILGLVTAVMGRLITMAW* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0986 162 Pfam Divergent PAP2 family 17 150 IPR003832 -
Ahy20g0986 162 PANTHER - 10 160 - -
Ahy20g0986 162 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 10 160 IPR003832 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0986 Ahy-Chr20 14338692 14341637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0986 K09775 - gmx:100815344 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0986 20 14338692 14341637 Ahy10g0707 10 7947446 7950403 hybridization
Ahy20g0986 20 14338692 14341637 Ahy13g4457 13 144691096 144693065 PCT
Ahy20g0986 20 14338692 14341637 Ahy3g4175 3 141694489 141696758 PCT
Ahy13g4457 13 144691096 144693065 Ahy20g0986 20 14338692 14341637 PCT
Ahy3g4175 3 141694489 141696758 Ahy20g0986 20 14338692 14341637 PCT