Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3853 ATGGAAGCTTCACTTAAGAACAAAAGATACAAAAAGATTATTGTTTCATCCCCCACAAACACTACTATTCAACGTTGCTATGCTTGCAAAAATGTTTGTAATAGTTCTCAGCCTAGTGCAGAAGCAAGGTTCTTTTGCAGATGGTGTAAATCTGAGTGTGTAAGTGTAGTTACTTCAAGAACAACTCCATACCTATGTTCTACATGCCACAATGTTAGTATTCCAACTCTGGGACAAGAGAAATCCAGGGAAGTGTGTGGAATATGCAGCCAAGTGAAGAAAATTGGAACAAAATTTTTCAAACATGGTTATCCGGATAATCGAAACAAAATTGGAACTTTACTAAGCAGAGAAGCACCATCTTCAATGGCTTTATCTTCCTCCTCATCATCCTTCCCAGGCAGACATAGCAAGCGTGCGGTTCTCTGTGGAGTTTCTTACACAAAAATGAAATTCAAACTCAAGGGAACTGTTAATGATGCTAACAACATGAGGGAGTTGCTGATTAAGAATTTCAAGTTTCCAAATGAGTGCATAAGAGTCCTCACAGAACAAGAGAAGAATGCTGATTTAATACCAACAAAACATAACATCATGGAGTCCTTAAGGTGGCTTGTGAAGGACTGCCAGGCAGGAGACTCCTTGGTCTTTTACTTCTCGGGGCACGGCCTGCAACAACCGGATTTCAAAGAAGATGAGATTGATGGATTTGATGAAGCTCTCTGTCCGGTTGATTTTATCAAAGAAGGAATGATCATTGACAATGATATAAATTCTACCATTGTTTGGCCTCTCAAGAGTGGTGTCACACTCCATGCCATTGTTGATGCCTGTCACAGTGGAACCATTCTTGATCTTCTCTATGTTTATAATCTTGAAAGGAACATTTGGGAGGATAACAAGCCACCATCAAAGGAACCTATCAGAAAACATACAAGTGGGGGAGTGGCAATTTGTCTCAGTGCATGTGAAGATAGCCAATCAGCTAATGATAGCACAGTCTTCGGTGGAAAGGGAATGAATGGTGTTCTTACGTATCTTCTCACAAAGGCAATAAGGGAACACCCTCAAATAACTTATGGGGCATTACTAGACAAGTTACAGATTGAAATTAAAAAGATTAATAGAAGTAGATGCCGTAGCAGCATCTTGCAACGTATCTTCCATCGTAAAATTGTACAGGATCCCCTTCTCTCATCATCAGAGAAATTTGATGTTTCTACAAAAATATTCGCATTGTGA 1242 0.3953 MEASLKNKRYKKIIVSSPTNTTIQRCYACKNVCNSSQPSAEARFFCRWCKSECVSVVTSRTTPYLCSTCHNVSIPTLGQEKSREVCGICSQVKKIGTKFFKHGYPDNRNKIGTLLSREAPSSMALSSSSSSFPGRHSKRAVLCGVSYTKMKFKLKGTVNDANNMRELLIKNFKFPNECIRVLTEQEKNADLIPTKHNIMESLRWLVKDCQAGDSLVFYFSGHGLQQPDFKEDEIDGFDEALCPVDFIKEGMIIDNDINSTIVWPLKSGVTLHAIVDACHSGTILDLLYVYNLERNIWEDNKPPSKEPIRKHTSGGVAICLSACEDSQSANDSTVFGGKGMNGVLTYLLTKAIREHPQITYGALLDKLQIEIKKINRSRCRSSILQRIFHRKIVQDPLLSSSEKFDVSTKIFAL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3853 413 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 65 412 - -
Ahy3g3853 413 SUPERFAMILY Caspase-like 141 376 IPR029030 -
Ahy3g3853 413 Pfam Caspase domain 138 402 - -
Ahy3g3853 413 PANTHER METACASPASE-4 65 412 - -
Ahy3g3853 413 Gene3D - 90 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3853 Ahy-Chr3 137961722 137965503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3853 K22684 - gmx:100796640 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4129 13 140829329 140832691 Ahy3g3853 3 137961722 137965503 hybridization
Ahy3g3853 3 137961722 137965503 Ahy20g0801 20 10206199 10208051 PCT
Ahy3g3853 3 137961722 137965503 Ahy10g0529 10 5242632 5244488 PCT
Ahy20g0801 20 10206199 10208051 Ahy3g3853 3 137961722 137965503 PCT
Ahy10g0529 10 5242632 5244488 Ahy3g3853 3 137961722 137965503 PCT