Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4129 ATGGAAGCTTCACTTAAGAACAAAAGATACAAAAAGATTATTGTTTCATCCCCCACAAACACTACTATTCAACGTTGCTATGCTTGCAAAAATGTTTGTAATAGTTCTCAGCCTAGTGCAGAAGCAAGGTTCTTTTGCAGATGGTGTAAATCTGAGTGTGTAAGTGTAGTTACTTCAAGAACAACTCCATACCTATGTTCTACATGCCACAATGTTAGTATTCCAACTCTGGGACAAGAGAAATCCAGGGAAGTGTGTGGAATATGCAGCCAAGTGAAGAAAATTGGAACAAAATTTTTCAAACATGGTTATCCGGATAATCGAAACAAAATTGGAACTTTGCTAAGCAGAGAAGCACCATCTTCAAAGGCTTTATCTTCCTCCTCATCATCCTTCCCAGGCAGACATAGCAAGCGTGCAGTTCTCTGTGGAGTTTCTTACACAAAAATGAAATTCAAGCTCAAGGGAACCGTTAATGATGCTAACAACATGAGGGAGTTGCTGATTAAGAATTTCAAGTTTCCAAATGAGTGCATAAGAGTCCTCACAGAACAAGAGAAGAATGCTGATTTAATACCAACAAAACATAACATCATGGAGTCCTTAAGGTGGCTTGTGAAGGACTGCCAGGCAGGAGACTCCTTGGTCTTTTACTTCTCGGGGCACGGCCTGCAACAACCGGATTTCAAAGAAGATGAGATTGATGGCTTTGATGAAGCTCTCTGTCCGGTTGATTTTATCAAAGAAGGAATGATCATTGACAATGATATAAATTCTACCATTGTTTGGCCTCTCAAGAGTGGTGTCACACTCCATGCCATTGTTGATGCCTGTCACAGTGGAACCATTCTTGATCTTCTCTATGTTTATAATCTTGAAAGGAACATTTGGGAGGATAACAAGCCACCATCAAAGGAACCTATCAGAAAACATACAAGTGGGGGAGTGGCAATTTGTCTCAGTGCATGTGAAGATAGCCAATCAGCTAATGATAGCACAGTCTTTGGTGGAAAAGGAATGAACGGTGTTCTTACTTATCTTCTCGCAAAGGCAATAAGGGAACACCCTCAAATAACTTATGGGGCATTACTAGACAAGTTACAGATTGAAATTAAAAAGATTAATAGAAGTAGATGCCGTAGCAGCATCTTGCAACGTATCTTCCATCGAAAAATTGTACAGGATCCCCTTCTCTCATCATCAGAGAAATTTGATGTTTCTACAAAAATATTCGCATTGTGA 1242 0.3969 MEASLKNKRYKKIIVSSPTNTTIQRCYACKNVCNSSQPSAEARFFCRWCKSECVSVVTSRTTPYLCSTCHNVSIPTLGQEKSREVCGICSQVKKIGTKFFKHGYPDNRNKIGTLLSREAPSSKALSSSSSSFPGRHSKRAVLCGVSYTKMKFKLKGTVNDANNMRELLIKNFKFPNECIRVLTEQEKNADLIPTKHNIMESLRWLVKDCQAGDSLVFYFSGHGLQQPDFKEDEIDGFDEALCPVDFIKEGMIIDNDINSTIVWPLKSGVTLHAIVDACHSGTILDLLYVYNLERNIWEDNKPPSKEPIRKHTSGGVAICLSACEDSQSANDSTVFGGKGMNGVLTYLLAKAIREHPQITYGALLDKLQIEIKKINRSRCRSSILQRIFHRKIVQDPLLSSSEKFDVSTKIFAL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4129 413 PANTHER METACASPASE-4 65 412 - -
Ahy13g4129 413 Gene3D - 87 413 - -
Ahy13g4129 413 SUPERFAMILY Caspase-like 141 376 IPR029030 -
Ahy13g4129 413 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 65 412 - -
Ahy13g4129 413 Pfam Caspase domain 138 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4129 Ahy-Chr13 140829329 140832691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4129 K22684 - gmx:100796640 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4129 13 140829329 140832691 Ahy3g3853 3 137961722 137965503 hybridization
Ahy13g4129 13 140829329 140832691 Ahy20g0801 20 10206199 10208051 PCT
Ahy13g4129 13 140829329 140832691 Ahy10g0529 10 5242632 5244488 PCT
Ahy20g0801 20 10206199 10208051 Ahy13g4129 13 140829329 140832691 PCT
Ahy10g0529 10 5242632 5244488 Ahy13g4129 13 140829329 140832691 PCT