Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0801 ATGGAAAGTACTAAACGACTGGCGATAGGGAAATGCATTGGGTGTGGGAAGCAAGTTCCTATGTTAGTTCCATTAGGAGCTCTTAATTCTGCCACACTGTGTTGTGATTGCAAAAGCGCTAATAATAACAATCCAAACCGACCACAGTATTGGGTGAATAACGCACCAGCCATTATATATGTAAATCATCACCCTAACCATGCAGCAGTACCAATATCTCATCAAAACTCACTTATTAGGCCACCGCCACCTCCTTTTTCTCCCTATGGCAACAAGAGGGCTCTCTTAATTGGAATCAGTTATGCCAAACGCTCTAACAGGATTAACGGTTCTTTGAACGATGTCAACTCCATCAAGTACTTCCTCATTCACAATTTGGATTTCCCTATTCATTCCATTCGCATGCTCACCGATGACAGAGAAGAGAAGGATCCGATGCGAATCCCAACAAAACGGAACATCGTACAGGCGATGAAGTGGTTGGTGGAAGGTTCCCAGGCAGGGGATTCACTGGTCTTCTATTTCTCTGGCCACGGAGCCAGGGAAGTGGACCGTAGCGGCGATGAGATCGACGGCTATGATGAAGCCATATGCCCTCTCGATTACGACAGAGAGGGAAACATAATCGACGACCAGATCAACGCCACAATTGTTAGGCCTTTGCCTCATGGTGCCAAACTCCATGCCATCGTTGATGCAAGCTTTAGCGGCACCGTTCTTGATCTCCCATTTATTTGCACAACCAACCGAAAAGGAAATTATGTATGGACGAATAAGAAAAGGCGGAGAGGTGGTTACAGAGGCACAAAGGGAGGACTAGCAGTTTGCATCTCAGCTTGTGGTGACGACGGAAAAGCTGCCGAAACGTCGGCGTTTAGCGGCATGGAAAGCAGCGGTGTCTTCACCTACAGTTTCATCAGAGCCATGCAAGAGGAGCCTCCTCACTTGACTTATGCTGCCTTGCTCAACGCCATGCGCTCTACAATCCGTGAAGCTAGTAAGGGGCAATTTGGTCTTATTGGTCGACACAATGGCATCGACACTCCCCTGCAATATGCTCATGAGCCACAATTGTCGTCATCTGACAAATTTGACGTTTATTATAAGCCGGTTTTAATGTAG 1122 0.4688 MESTKRLAIGKCIGCGKQVPMLVPLGALNSATLCCDCKSANNNNPNRPQYWVNNAPAIIYVNHHPNHAAVPISHQNSLIRPPPPPFSPYGNKRALLIGISYAKRSNRINGSLNDVNSIKYFLIHNLDFPIHSIRMLTDDREEKDPMRIPTKRNIVQAMKWLVEGSQAGDSLVFYFSGHGAREVDRSGDEIDGYDEAICPLDYDREGNIIDDQINATIVRPLPHGAKLHAIVDASFSGTVLDLPFICTTNRKGNYVWTNKKRRRGGYRGTKGGLAVCISACGDDGKAAETSAFSGMESSGVFTYSFIRAMQEEPPHLTYAALLNAMRSTIREASKGQFGLIGRHNGIDTPLQYAHEPQLSSSDKFDVYYKPVLM* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0801 373 Pfam Caspase domain 92 367 - -
Ahy20g0801 373 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 11 372 - -
Ahy20g0801 373 PANTHER METACASPASE-4 11 372 - -
Ahy20g0801 373 Gene3D - 37 371 - -
Ahy20g0801 373 SUPERFAMILY Caspase-like 79 332 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0801 Ahy-Chr20 10206199 10208051 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0801 K22684 - gmx:100779288 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0801 20 10206199 10208051 Ahy20g0801 20 10206199 10208051 ECH
Ahy20g0801 20 10206199 10208051 Ahy10g0529 10 5242632 5244488 hybridization
Ahy13g4129 13 140829329 140832691 Ahy20g0801 20 10206199 10208051 PCT
Ahy3g3853 3 137961722 137965503 Ahy20g0801 20 10206199 10208051 PCT
Ahy20g0801 20 10206199 10208051 Ahy13g4129 13 140829329 140832691 PCT
Ahy20g0801 20 10206199 10208051 Ahy3g3853 3 137961722 137965503 PCT