Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy3g2571 | ATGGCCATGACCCGTGAATCTTGGGCTTTTGTGTTTGGCCTCATAGGCAACGTGATCTCTTTTGCGGTGTTCCTTGCTCCAATACCGACCTTTTACCAAATATATAAGAAGAAAACGAGCGAGGGATTTCAGTCACTTCCATATGTGGTTGCACTCTTTAGTGCAATGCTTTGGATTTACTATGCATTGGTTAAGAAAGATGCTGCTCTTCTTCTTATCACCATTAATACCTTTGGAATTGTTGTAGAAACTGCTTACCTTGCCATCTTCCTGTTTTATGCCCCAAAGAAGGCTAGGTTTTCCACTATCAAGCTTCTTATGTTGCTGAATGTGTTTGGATTTGGAGCTATGTTGTTGGCAACTCTGTACCTATCTAAGGGAGCGAAGCGTCTTGCTATCATTGGATGGATTTGTCTCGTTTTTAACATTAGTGTTTTTGCTGCGCCTCTCTTCATCATGAGGAAAGTGATCAAGACGAGGAGTGTGGAGTACATGCCATTCACTTTGTCCTTCTTCTTAACCATCAACGCCGTTATGTGGTTCTTCTATGGCCTTTTCCTCAAAGACTACTACATTGCTCTTCCGAACACGCTGGGATTTCTGTTCGGGATCATTCAGATGGTGCTGTATTTGATGTACAGAAATGCGACACCGGTGGCACTGCAAGAGCCAGTGAAAGCACAAGAGCTTAATGGCCACACCATCGATGTTCTCAAGATCGACACCAATCATGCTCTTGCCAAAGTCTAA | 750 | 0.4333 | MAMTRESWAFVFGLIGNVISFAVFLAPIPTFYQIYKKKTSEGFQSLPYVVALFSAMLWIYYALVKKDAALLLITINTFGIVVETAYLAIFLFYAPKKARFSTIKLLMLLNVFGFGAMLLATLYLSKGAKRLAIIGWICLVFNISVFAAPLFIMRKVIKTRSVEYMPFTLSFFLTINAVMWFFYGLFLKDYYIALPNTLGFLFGIIQMVLYLMYRNATPVALQEPVKAQELNGHTIDVLKIDTNHALAKV* | 250 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy3g2571 | 249 | PANTHER | RAG1-ACTIVATING PROTEIN 1 | 4 | 243 | - | - | |
| Ahy3g2571 | 249 | PANTHER | BIDIRECTIONAL SUGAR TRANSPORTER SWEET | 4 | 243 | - | - | |
| Ahy3g2571 | 249 | Gene3D | - | 129 | 220 | - | - | |
| Ahy3g2571 | 249 | Pfam | Sugar efflux transporter for intercellular exchange | 133 | 216 | IPR004316 | GO:0016021 | |
| Ahy3g2571 | 249 | Pfam | Sugar efflux transporter for intercellular exchange | 11 | 98 | IPR004316 | GO:0016021 | |
| Ahy3g2571 | 249 | Gene3D | - | 10 | 99 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy3g2571 | Ahy-Chr3 | 114918133 | 114919736 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy3g2571 | 1 | 242 | Miscellaneous Gene Families | AT5G50800 | 58.848 | 1.04e-101 | 296 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy3g2571 | K15382 | - | gmx:100805676 | 426.017 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy13g2914 | 13 | 117476402 | 117477999 | Ahy3g2571 | 3 | 114918133 | 114919736 | hybridization | |
| Ahy3g2571 | 3 | 114918133 | 114919736 | Ahy18g2928 | 18 | 134237168 | 134239586 | PCT | |
| Ahy3g2571 | 3 | 114918133 | 114919736 | Ahy8g2683 | 8 | 50231314 | 50233742 | PCT | |
| Ahy18g2928 | 18 | 134237168 | 134239586 | Ahy3g2571 | 3 | 114918133 | 114919736 | PCT | |
| Ahy8g2683 | 8 | 50231314 | 50233742 | Ahy3g2571 | 3 | 114918133 | 114919736 | PCT |