Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2914 ATGGCCATGACCCGTGAATCTTGGGCTTTTGTGTTTGGCCTCATAGGCAACGTGATCTCCTTTGCGGTGTTCCTTGCTCCAATACCGACCTTCTACCAAATATATAAGAAGAAAACGAGCGAAGGATTTCAGTCACTTCCATATGTGGTTGCACTCTTTAGTGCAATGCTTTGGATTTATTATGCATTGGTTAAGAAAGATGCTGCTCTTCTTCTTATCACCATTAACACCTTTGGAATTGTTGTAGAAACTGCTTACCTTGCTATCTTCCTGTTTTATGCCCCAAAGAAGGCTAGGTTTTCGACGATCAAGCTTCTTATGTTGCTGAATGTGTTTGGGTTTGGAGCTATGTTGTTGGCAACTCTGTATTTATCTAAGGGAGCGAAGCGTCTTGCTATCATTGGATGGATTTGCCTCGTCTTCAACATTAGTGTTTTCGCTGCGCCTCTCTTCATCATGAGGAAAGTGATCAAGACGAGGAGTGTGGAGTACATGCCATTCACCTTGTCCTTCTTCTTAACCATCAACGCCGTTATGTGGTTCTTCTATGGCCTTTTCCTCAAAGACTACTACATTGCTCTTCCGAACACGCTGGGATTTCTGTTCGGGATCATTCAGATGGTGCTGTATTTGATGTACAGAAATGCGACACCGGTGGCACTGCAAGAGCCAGTGAAAGCGCAAGAGCTTAATGGCCATACCATCGATGTTCTCAAGATCGACACCAATCATGCTCTTGCCAAAGTCTAA 750 0.44 MAMTRESWAFVFGLIGNVISFAVFLAPIPTFYQIYKKKTSEGFQSLPYVVALFSAMLWIYYALVKKDAALLLITINTFGIVVETAYLAIFLFYAPKKARFSTIKLLMLLNVFGFGAMLLATLYLSKGAKRLAIIGWICLVFNISVFAAPLFIMRKVIKTRSVEYMPFTLSFFLTINAVMWFFYGLFLKDYYIALPNTLGFLFGIIQMVLYLMYRNATPVALQEPVKAQELNGHTIDVLKIDTNHALAKV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2914 249 PANTHER RAG1-ACTIVATING PROTEIN 1 4 243 - -
Ahy13g2914 249 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 243 - -
Ahy13g2914 249 Gene3D - 129 220 - -
Ahy13g2914 249 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Ahy13g2914 249 Pfam Sugar efflux transporter for intercellular exchange 11 98 IPR004316 GO:0016021
Ahy13g2914 249 Gene3D - 10 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2914 Ahy-Chr13 117476402 117477999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2914 1 242 Miscellaneous Gene Families AT5G50800 58.848 1.04e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2914 K15382 - gmx:100805676 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2914 13 117476402 117477999 Ahy3g2571 3 114918133 114919736 hybridization
Ahy13g2914 13 117476402 117477999 Ahy18g2928 18 134237168 134239586 PCT
Ahy13g2914 13 117476402 117477999 Ahy8g2683 8 50231314 50233742 PCT
Ahy18g2928 18 134237168 134239586 Ahy13g2914 13 117476402 117477999 PCT
Ahy8g2683 8 50231314 50233742 Ahy13g2914 13 117476402 117477999 PCT