Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2928 ATGCCACACAGTCCTTTAGTTTTCACCTTTGGAATTCTAGGCAACATTGCTTCCTTTGTATGCTTTCTAGCACCACTACCAACATTTTATAGAGTATGCAAGAAGAAATCAACAGAAGGATTCCAATCAATTCCATATGTGGCAGCACTCTTCAGTGCAATGCTTTGGATCTTCTATGCCTATGTCAAAACCGGAGAAACTCTTCTTATCACAATCAATGCATTTGGTTGTGTCATTGAGACTATTTACCTTGCCATTTTCATCACTTACTGCCCCAAGAAAGTTAGGATGTCCACATTGAGAATGATTCTATTATTGAACTTTGGAGGATTTTGCACAATTGTTCTATTAACACATATCCTAGCAAAAGGAGCAAACCGTCTCAAGCTTCTTGGATGGATTTGTGTTGTCTTTGCCACTAGTGTTTTTGCAGCACCTTTGAGCATCATTAGGACGGTTATCCGAACCAAAAGCGTGGAGTTCCTTCCTTTTCCTCTTTCTCTTCTTCTTTTTATTAGCGCAATCATGTGGCTATTGTACGGCATCTTCCTCAAAGACATTTACGTTACGCTCCCGAACATTGTGGGGTTAACATTTGGAACGGTTCAAATGGTTCTCTATGCAATGTATCGAAATAAAAAACCGGTTCAAGATGAGAAGCTACCAGAACACAAAGCTGCCGACATTGAAAACAACATCGAAGAAAGCGTCGAAGACGAGAAGAAAAAGCAGAAGGAGGAGAAAAAACGCGATATTGAGAAAATAGAAGTAATAGTAAAAAACATAGAAATGAAAGAAACAAAAGAAGAAAAAGAAGAAGAGAAGAATGAAGATTCGTCTTCACAAAAAGAAAACAACCAAACAGAAGTTAAGGACAAGAATGACAACAATAACAACAAGTCATGA 906 0.3808 MPHSPLVFTFGILGNIASFVCFLAPLPTFYRVCKKKSTEGFQSIPYVAALFSAMLWIFYAYVKTGETLLITINAFGCVIETIYLAIFITYCPKKVRMSTLRMILLLNFGGFCTIVLLTHILAKGANRLKLLGWICVVFATSVFAAPLSIIRTVIRTKSVEFLPFPLSLLLFISAIMWLLYGIFLKDIYVTLPNIVGLTFGTVQMVLYAMYRNKKPVQDEKLPEHKAADIENNIEESVEDEKKKQKEEKKRDIEKIEVIVKNIEMKETKEEKEEEKNEDSSSQKENNQTEVKDKNDNNNNKS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2928 301 MobiDBLite consensus disorder prediction 219 250 - -
Ahy18g2928 301 Gene3D - 9 94 - -
Ahy18g2928 301 Pfam Sugar efflux transporter for intercellular exchange 9 94 IPR004316 GO:0016021
Ahy18g2928 301 Pfam Sugar efflux transporter for intercellular exchange 130 214 IPR004316 GO:0016021
Ahy18g2928 301 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 278 - -
Ahy18g2928 301 PANTHER RAG1-ACTIVATING PROTEIN 1 5 278 - -
Ahy18g2928 301 Gene3D - 126 221 - -
Ahy18g2928 301 MobiDBLite consensus disorder prediction 266 301 - -
Ahy18g2928 301 Coils Coil 226 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2928 Ahy-Chr18 134237168 134239586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2928 3 229 Miscellaneous Gene Families AT5G23660 59.912 1.05e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2928 K15382 - gmx:100791106 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2928 18 134237168 134239586 Ahy8g2683 8 50231314 50233742 hybridization
Ahy13g2914 13 117476402 117477999 Ahy18g2928 18 134237168 134239586 PCT
Ahy3g2571 3 114918133 114919736 Ahy18g2928 18 134237168 134239586 PCT
Ahy18g2928 18 134237168 134239586 Ahy13g2914 13 117476402 117477999 PCT
Ahy18g2928 18 134237168 134239586 Ahy3g2571 3 114918133 114919736 PCT