Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy3g2550 | ATGGCAAATCACGGTCGAAGGAGTGTGTCATTGACCAACAGTCCCTCGCGCCCTAAGAAGAAGAAAAACTTCTCTTCCGAGCTTTCATCCCCTGATATTCGAAAATCCTTTACCCCTCAACGCACGGGAGAGAGAACTGTGAGGTCATTAAGACTTTCAAGAGCATTGACAGTGCCCGACTCAACAAGTATTTCTGAAGCATGTCGTCGTATGGCTGCTCGCAAAGTCGATTCTCTTTTACTAACCGATTCGAATGCTTTGCTCTGTGGAATCCTGACGGACAAGGATATAGCTACAAGAGTCATTGCGCGCGAGGTTAATCTTGAAGACACACCCGTTTCCAAGGTTATGACAAGGAATCCAGTATTCGTCCTTTCCGATACTCTTGCTGTGGAAGCACTCCAAAAGATGGTTCAAGGAAAATTCAGGCATTTACCTGTGGTGGAAAATGGAGAAGTTGTTGCCATACTTGACATAGCAAAGTGTTTGTATGATGCCATTGCGCGCCTTGAAAGGGCAGCTGAGAAAGGAAAGGCAATTGCAGCGGCAGTTGAAGGCTCCAATTCCTCATTCTTGGAGACTCTTCGGGACCAGATATTCAAGCCTTCTTTGTCTACAATTATTCCTGAGAAATCAAAGGTTATAACAGTTTCACCAACGGACACAGTTTTGGCAACAACAAAGAAGATGCTTGAACTTCGTGTCAGTTGTGCTGTTGTCATGGTTGATGACAAACCTTGTGGTATCCTCACTTCAAAGGATATCTTGATGCGAGTAATAGCGCAAAACCTTCCTGCATCAACAACTCTTGTTGAGAAGGCCATGACTCCAAATCCAGAATGTGCAAAAGTTGATACACCGATTGTTGATGCACTTCACACCATGCAAGATGGAAAATTTTTACATCTTCCAGTGCTTGATAAAGATGGCACTGTTGTTGCTATGCTTGATGTGATACATATTGCTCATGCTGCTATTGCAACAGCTGGTCAGGTTGGAAATACTGCCAATTTGAACACTGAAGCTGCCGACTCCATGATACAAAAGTTTTGGGATTCGGCCATATCCTTAAGTAGTCCAAATGATGATGACGACGACGATTCACGAAGTGATAGTTCCTTGAAAATTGCTTCTGAGGGAAGAGAAATAGGGAGAACCACTCCTTTTAATGCAGCAAGCATGCTGCAGCAAGCATTTTCTTTCAAAGTACAAGATAGGAAAGGCAGACTTCATAGATTCACATGTGATACTCGGAGCTTGACAGATGTTATAGCTTCCATTTCTCAGAAAGTTGATAATGATATTGACTCTGATAATAACCTGCCCCAGATTATGTATGAAGACGAAGAACATGATAAAATTGTACTAGCTTCAGACAGTGATCTTGCTGCAGCTGTGGAACACGCAAAGGCAGCTGGTTTAAAGGGATTAAGATTGCATTTAGAGTACTCGGGGCAAAATGATAACCAAAGAAACTCTAGCAAGGAGAGTTTGTTGGCATACACAAACACAAGTTTAATGTGGCCCTCAACATATAGTGTGGTTGCAGCTGGAGCTGTAATCGTTGCTGGCTTAAGCCTATTAGCATTCTTCAGGCGAAGGTGA | 1605 | 0.4305 | MANHGRRSVSLTNSPSRPKKKKNFSSELSSPDIRKSFTPQRTGERTVRSLRLSRALTVPDSTSISEACRRMAARKVDSLLLTDSNALLCGILTDKDIATRVIAREVNLEDTPVSKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVVAILDIAKCLYDAIARLERAAEKGKAIAAAVEGSNSSFLETLRDQIFKPSLSTIIPEKSKVITVSPTDTVLATTKKMLELRVSCAVVMVDDKPCGILTSKDILMRVIAQNLPASTTLVEKAMTPNPECAKVDTPIVDALHTMQDGKFLHLPVLDKDGTVVAMLDVIHIAHAAIATAGQVGNTANLNTEAADSMIQKFWDSAISLSSPNDDDDDDSRSDSSLKIASEGREIGRTTPFNAASMLQQAFSFKVQDRKGRLHRFTCDTRSLTDVIASISQKVDNDIDSDNNLPQIMYEDEEHDKIVLASDSDLAAAVEHAKAAGLKGLRLHLEYSGQNDNQRNSSKESLLAYTNTSLMWPSTYSVVAAGAVIVAGLSLLAFFRRR* | 535 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy3g2550 | 534 | ProSiteProfiles | PB1 domain profile. | 396 | 484 | IPR000270 | GO:0005515 | |
| Ahy3g2550 | 534 | PANTHER | CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED | 29 | 522 | IPR034896 | - | |
| Ahy3g2550 | 534 | Pfam | CBS domain | 212 | 257 | IPR000644 | - | |
| Ahy3g2550 | 534 | Pfam | CBS domain | 271 | 324 | IPR000644 | - | |
| Ahy3g2550 | 534 | Pfam | CBS domain | 54 | 99 | IPR000644 | - | |
| Ahy3g2550 | 534 | Pfam | CBS domain | 113 | 157 | IPR000644 | - | |
| Ahy3g2550 | 534 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
| Ahy3g2550 | 534 | Gene3D | - | 28 | 182 | IPR046342 | - | |
| Ahy3g2550 | 534 | ProSiteProfiles | CBS domain profile. | 275 | 332 | IPR000644 | - | |
| Ahy3g2550 | 534 | Gene3D | - | 398 | 481 | - | - | |
| Ahy3g2550 | 534 | SUPERFAMILY | CBS-domain pair | 212 | 324 | IPR046342 | - | |
| Ahy3g2550 | 534 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 29 | 522 | - | - | |
| Ahy3g2550 | 534 | MobiDBLite | consensus disorder prediction | 29 | 46 | - | - | |
| Ahy3g2550 | 534 | SUPERFAMILY | CAD & PB1 domains | 389 | 485 | - | - | |
| Ahy3g2550 | 534 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
| Ahy3g2550 | 534 | ProSiteProfiles | CBS domain profile. | 51 | 111 | IPR000644 | - | |
| Ahy3g2550 | 534 | ProSiteProfiles | CBS domain profile. | 117 | 175 | IPR000644 | - | |
| Ahy3g2550 | 534 | SUPERFAMILY | CBS-domain pair | 44 | 160 | IPR046342 | - | |
| Ahy3g2550 | 534 | Pfam | PB1 domain | 399 | 482 | IPR000270 | GO:0005515 | |
| Ahy3g2550 | 534 | SMART | PB1_new | 398 | 484 | IPR000270 | GO:0005515 | |
| Ahy3g2550 | 534 | CDD | CBS_pair_MUG70_1 | 52 | 168 | - | - | |
| Ahy3g2550 | 534 | MobiDBLite | consensus disorder prediction | 358 | 380 | - | - | |
| Ahy3g2550 | 534 | Gene3D | - | 202 | 329 | IPR046342 | - | |
| Ahy3g2550 | 534 | CDD | CBS_pair_MUG70_2 | 211 | 318 | - | - | |
| Ahy3g2550 | 534 | ProSiteProfiles | CBS domain profile. | 207 | 267 | IPR000644 | - | |
| Ahy3g2550 | 534 | SMART | cbs_1 | 213 | 260 | IPR000644 | - | |
| Ahy3g2550 | 534 | SMART | cbs_1 | 278 | 326 | IPR000644 | - | |
| Ahy3g2550 | 534 | SMART | cbs_1 | 120 | 164 | IPR000644 | - | |
| Ahy3g2550 | 534 | SMART | cbs_1 | 54 | 102 | IPR000644 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy3g2550 | Ahy-Chr3 | 113064207 | 113067943 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy3g2550 | - | - | adu:107479973 | 984.171 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy13g2893 | 13 | 115734069 | 115737838 | Ahy3g2550 | 3 | 113064207 | 113067943 | hybridization | |
| Ahy3g2550 | 3 | 113064207 | 113067943 | Ahy18g2809 | 18 | 132360942 | 132367512 | PCT | |
| Ahy3g2550 | 3 | 113064207 | 113067943 | Ahy8g2525 | 8 | 48104583 | 48111201 | PCT | |
| Ahy18g2941 | 18 | 134458149 | 134464201 | Ahy3g2550 | 3 | 113064207 | 113067943 | PCT | |
| Ahy8g2697 | 8 | 50426966 | 50432964 | Ahy3g2550 | 3 | 113064207 | 113067943 | PCT |